Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2759 ATGGATAAACGAGGAGATGGGATTTTCCCGGATGAGGTGGTTATGCAGATTCTTGCAAGGTTGCCTGTGAAATCCCTTTTCAGGAGCAAAACCGTGTGCAAATTGTGGTGTAGATTGTCCTCAGATAAGTATTTTGTTCAACTCTACAATGAGGTATCTAGGAAGAATCCCATGATTCTTGTTGAGATTTCTGATACATCAGAGTCCAAATCTAGCTTAATCTGTGTTGATAGTTTAAGGGGTGTTTCTGAATTTTCACTCAGCTTTTTGAATGATAGAGTTAAGGTTCGTGCATCTTGTAATGGCTTGTTGTGTTGCTCTAGTATTCCTGATAAGGGTGTGTTCTATGTTTGCAACCCGGTCACTCGCGAGTTTAGGCTGCTTCCCAGGAGTAGGGAAAGGCATGTCACTCGGTTTTACCCCGATGGCGAAGCGACCTTGGTTGGATTGGCCTGTGATTCGACGTGCCAGAGGTTTAATGTTGTTCTCGCGGGCTGCCACCGCACGTTTGGTCATAGGCCGGATGGAAGTTTCATATGTCTGGTGTTTGATTCGGAGCTGAACAAGTGGAGGAAGTTTGTTTCTTTTCAGGATGATCATTTTACTCACATGAATAAGAACCAAGTTGTTTTTGTGAATAATGCTCTGCACTGGTTGACTGTTAGCTCTACTTATATACTTGTGCTTGATTTAAGCTGTGACAATTGGAGGAAGATGCCGTTACCGTATGACTTGGTTCGAGGAACGGGAAATAGGATTTATCTCTTGGACTTCAATGGCTGCCTTTCTATTATTCAAATTTCAGAAGCGTGGATGAACATTTGGGTGCTGAAAGATTACTGGAATGATGAATGGTGCATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCGGGGATTTTCCCGATCAGTCAGACAGGTGAATATGTTTTTCTGGCTACTCATAGGCAGGTTTTGGTGTATCATCGCAACAGTAAAGTCTGGAAAGAAATGTACTCTGTTAAGTATAGTTCCTCACTACCGCTCTGGTTTTCAGCACACGCATATCGCAGCACAATGTTCTCATGTAGCTGA 1083 0.4331 MDKRGDGIFPDEVVMQILARLPVKSLFRSKTVCKLWCRLSSDKYFVQLYNEVSRKNPMILVEISDTSESKSSLICVDSLRGVSEFSLSFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLPRSRERHVTRFYPDGEATLVGLACDSTCQRFNVVLAGCHRTFGHRPDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDNWRKMPLPYDLVRGTGNRIYLLDFNGCLSIIQISEAWMNIWVLKDYWNDEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHRQVLVYHRNSKVWKEMYSVKYSSSLPLWFSAHAYRSTMFSCS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2759 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 358 - -
Lja6g2759 360 Gene3D - 9 45 - -
Lja6g2759 360 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Lja6g2759 360 SMART fbox_2 9 49 IPR001810 GO:0005515
Lja6g2759 360 SUPERFAMILY F-box domain 9 73 IPR036047 GO:0005515
Lja6g2759 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 358 - -
Lja6g2759 360 Pfam F-box-like 10 43 IPR001810 GO:0005515
Lja6g2759 360 TIGRFAM F_box_assoc_1: F-box protein interaction domain 99 324 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2759 Lja-Chr6 56706504 56708063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2759 - - gmx:100811223 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2759 6 56706504 56708063 Lja6g2759 6 56706504 56708063 ECH