Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2554 ATGGCAGATCTCAAGTCCACATTCTTGAATGTCTACTCCGTCCTCAAATCGGAGCTCCTCCACGACCCCGCCTTCGAGTGGTCCGATGAATCTCGTCAATGGGTTGACCGGATGCTGGACTACAATGTTCCTGGAGGGAAGCTGAACCGTGGTCTGTCAGTTATTGACAGCTATAGATTGCTAAAAGAAGGACAGGCATTAAATGATGACGAAATTTTCCTTGCTAGTGCTCTTGGTTGGTGTATTGAATGGCTTCAGGCATATTTTCTTGTTCTTGATGACATTATGGATAACTCTCACACACGTCGGGGTCAGCCATGCTGGTATAGAATACCCAAGGTTGGACTGATTGCAGCAAATGATGGAATTCTCCTACGAAATCATATTCCCCGTATCCTTAAGAAACACTTCAGGGGAAAGCCATACTACGCTGATCTTCTTGATTTGTTCAATGAGGTTGAGTTCCAGACTGCTTCAGGACAGATGATAGATCTGATCACCACACTGGAAGGAGAAAAGGACCTTTCCAAATACACATTATCACTGCATCGGCGTATTGTTCAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTTGCATGTGCATTGCTCATGGCTGGTGAGAATCTGGATAACCATATTGATGTGAAGGACATTCTTGTTGAGATGGGAACATACTTTCAAGTTCAGGATGATTATTTGGATTGCTTTGGTGATCCTCAAACAATTGGAAAGATAGGTACAGATATTGAAGATTATAAATGCTCTTGGTTAGCTGTGAAAGCAGTGGAACTTAGCAATGAAGAACAAAAGAAAGTTTTATATGAAAACTATGGGAGACCAGATCCAGAAAATGTTGCTAAAGTGAAGGTCCTGTATAACAAGCTTAATCTTCAGGGTGTATTTGCTGAGTATGAGAGCTCGACCTATGAGAAGCTTGTGAGCTCCATTGACGCTCATCCTAGCAAAGCAGTTCAAGCTGTCTTGAAGTCCTTCTTGGCTAAAATTTACAAGAGGGAGAAGTAG 1029 0.4227 MADLKSTFLNVYSVLKSELLHDPAFEWSDESRQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWYRIPKVGLIAANDGILLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHIDVKDILVEMGTYFQVQDDYLDCFGDPQTIGKIGTDIEDYKCSWLAVKAVELSNEEQKKVLYENYGRPDPENVAKVKVLYNKLNLQGVFAEYESSTYEKLVSSIDAHPSKAVQAVLKSFLAKIYKREK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2554 342 ProSitePatterns Polyprenyl synthases signature 2. 224 236 IPR033749 -
Lja6g2554 342 PANTHER FARNESYL PYROPHOSPHATE SYNTHASE 1-LIKE 1 342 - -
Lja6g2554 342 CDD Trans_IPPS_HT 30 340 IPR000092 GO:0008299
Lja6g2554 342 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 1 342 IPR039702 GO:0008299|GO:0016765
Lja6g2554 342 Pfam Polyprenyl synthetase 33 296 IPR000092 GO:0008299
Lja6g2554 342 SFLD Polyprenyl Transferase Like 15 340 - -
Lja6g2554 342 SUPERFAMILY Terpenoid synthases 6 341 IPR008949 -
Lja6g2554 342 Gene3D Farnesyl Diphosphate Synthase 2 341 IPR008949 -
Lja6g2554 342 ProSitePatterns Polyprenyl synthases signature 1. 90 104 IPR033749 -
Lja6g2554 342 SFLD Isoprenoid Synthase Type I 15 340 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2554 K00787 - gmx:100802347 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2554 6 54342125 54346398 Lja6g2554 6 54342125 54346398 ECH