Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2432 ATGGTTTCCCTACAAACATCAGCTCTTGTTTCTTCTTCCTGTTCTTCTATCAGGACAGTTAGCGCAGCTATCCATGTCCCTAAACTCCCAAGATTGTCTTTCCGGGTTCCGCAATTAGCAAAAACTAAGCTGGTTGAGGAATTCAATGGAACCAAAGACAGGACCCAATTACAAAACAATGTCCTCACAGAACAAACATATGACGCTGTTGCTGACAGAATTGAAATGCACCAAAACATTGGCGAGCAGCGTGACAACTGGAACACTCTTCTTTTGAACTCCATCAACATGATTACTCTCACCGCCACAACCATGGCTGGTGTTGTCGCTGCCACTGGTGGTGCTGGTGCACCACTTCTGGCATTGAAACTGTCATCTGCTTTATTGTTTTCGGCGGCTACAGGGTTGTTGCTTGTCATGAACAAGATTCAGCCCTCTCAACTCACTGAGGAGCAACGAAATGCAACTAGATTGTTTAAACAACTCAAGTCCCACATCGAAACCACAATTGCAATTGGAAATCCTTCAGAGGAAGATGTGAAGAGTGCAATGGAGAAGGTTTTGGCCCTTGACAGAGCTTATCCACTTCCCCTGTTGGGTGCTATGCTTGAAAAATTCCCTGCAACATTTGAACCAGCAAGGTGGTGGCCTTCAACTCAGTTCCAAAGGGAAAACAATGTAAAAGTACAGAGCAAAAGAATGGGAAAAGTGAATGGATGGAGTGAAGAACTAGAAATGGAAATGAGGGAAGTTATGGAAGTGGTGAGGAGAAAGGACAGTGAGGATTATGACAGGCTTGGAAACATAGCCTTGAAAATCAACAAGACTTTGGCCATTGCTGGGCCCTTACTCACAGGAGTTGCAGCAGTGGGATCTACATTTGTGGGAAATGGTTCTTGGGCAGCCTTTGTTCCCCTAGTGGCTGGCTCATTGGCTGCAGCAATTAACACTTTTGAGCATGGAGGGCAAGTAGGCATGGTTTTTGAAATGTACAGAACATCTGCAGGCTTCTTCAACATGTTGGACACCTCAATTGAATCAACATTAGGAGAGAAAGATTTGGAGAGAAGAGAAAATGGGGAGCTCTTTGAAATGAAGATGGCTTTGCAATTGGGAAGAAGTGTGTCACAGCTGAGGGAACTATCCTCAAAATCTACTTCCTCTCTTGTTTCTTCTTCCTGTTCTTCTATCAGGACAGTTAGCGCAGCTATCCATGTCCCTAAACTCCCAAGAGTGTCTTTCCGGGTTCCGCAATTACCAAAAACTAAGCTAGTTGAGGAATTCAATGGATCCAAAGACACAAACCAATTACAAAACAATGTCCTCACTGAACAAACATTATTTGACGGTTTATTACACAATAACAACAAGTCAAAGGTAACTGTCCAGCTCTATGCAATCTTGGAAGCTGTAGCTGACAGAATTGAAATGCACCAAAACATTGGCGAGCAGCGTGACAATTGGAACACCCTTCTTTTGAACTCCATCAACATGATTACTCTCACAGCCACAACCATGGCTGGTGTTGCCGCTGCCACTGGTGGTGCTGGTGCACCACTTCTGGCATTGAAACTGTCATCTGCTTTATTGTTTTCGGCGGCTACAGGGTTGTTGCTTGTCATGAACAAGATTCAGCCCTCTCAACTCACTGAGGAGCAACGAAATGCAACTAGATTGTTTAAACAACTCAAGTCCCACATTGAAACCTCAATTGCAATTGGAAATCCTTCAGAGGAAGATGTGAAGGGTGCAATGGAGAAGGTTTTGGCCCTTGACAGAGCTTATCCACTTCCCCTGTTGGGTGCTATGCTAGAGAAATTCCCTGCAAAGTTTGAGCCAGCTGTTTGGTGGCCTTCTACTCAGTTTCAAAGGAAAGAAAAAGCACAGGACAAGAGAATGGGGAAAATGAATGGATGGAGTGAAGAACTAGAAATGGAAATGAGGGAAGTTAAGGAAGTAGTAAAGAGAAAAGACATTGAGGATTATGACAGACTTGGAAACATTGCATTGAAGATTCACAAGAATTTGGCCATTGCTGGGCCTTTACTCACAGGCATTGCAGCAGCAGGGTCTGCATTTGTGGGAAATGGGTCATATGCAGCTTTGGTTCCACTCATGGCTGGCTCATTGGCTGCAGCAATTAATACTTTTGAGCATGGAGGGCAAGTAGGCATGGTGTTTGAAATGTACAGAACATCTGCAGGCTTCTTCAACATGTTGGAAACCTCAATTGAATCAACATTAGAAGAGAAAGATTTGGAGAGAAGAGAGAATGGGGAGCTCTTTGAAATGAAGATGGCTTTGCAATTGGGAAGAAGTGTATCACAGCTAAGGGAACTTGCCTCAAAATCAGCTTCCTATAGCATGGAAGGAATGGACATTGATGAATTTGCCAGCAAGTCTCTCATTTTACTTTTTTCCTGTTATATCATAATTCTTATCTACCTCCAAAGAGTGTTACATTTCCACATATCACTTTAA 2481 0.4345 MVSLQTSALVSSSCSSIRTVSAAIHVPKLPRLSFRVPQLAKTKLVEEFNGTKDRTQLQNNVLTEQTYDAVADRIEMHQNIGEQRDNWNTLLLNSINMITLTATTMAGVVAATGGAGAPLLALKLSSALLFSAATGLLLVMNKIQPSQLTEEQRNATRLFKQLKSHIETTIAIGNPSEEDVKSAMEKVLALDRAYPLPLLGAMLEKFPATFEPARWWPSTQFQRENNVKVQSKRMGKVNGWSEELEMEMREVMEVVRRKDSEDYDRLGNIALKINKTLAIAGPLLTGVAAVGSTFVGNGSWAAFVPLVAGSLAAAINTFEHGGQVGMVFEMYRTSAGFFNMLDTSIESTLGEKDLERRENGELFEMKMALQLGRSVSQLRELSSKSTSSLVSSSCSSIRTVSAAIHVPKLPRVSFRVPQLPKTKLVEEFNGSKDTNQLQNNVLTEQTLFDGLLHNNNKSKVTVQLYAILEAVADRIEMHQNIGEQRDNWNTLLLNSINMITLTATTMAGVAAATGGAGAPLLALKLSSALLFSAATGLLLVMNKIQPSQLTEEQRNATRLFKQLKSHIETSIAIGNPSEEDVKGAMEKVLALDRAYPLPLLGAMLEKFPAKFEPAVWWPSTQFQRKEKAQDKRMGKMNGWSEELEMEMREVKEVVKRKDIEDYDRLGNIALKIHKNLAIAGPLLTGIAAAGSAFVGNGSYAALVPLMAGSLAAAINTFEHGGQVGMVFEMYRTSAGFFNMLETSIESTLEEKDLERRENGELFEMKMALQLGRSVSQLRELASKSASYSMEGMDIDEFASKSLILLFSCYIIILIYLQRVLHFHISL* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2432 826 Coils Coil 640 660 - -
Lja6g2432 826 PANTHER PLANT-LIKE PROTEIN, PUTATIVE-RELATED 390 800 - -
Lja6g2432 826 PANTHER PLANT-LIKE PROTEIN, PUTATIVE-RELATED 10 388 - -
Lja6g2432 826 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 390 800 IPR027949 -
Lja6g2432 826 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 10 388 IPR027949 -
Lja6g2432 826 Pfam Petal formation-expressed 463 778 IPR027949 -
Lja6g2432 826 Pfam Petal formation-expressed 67 379 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2432 Lja-Chr6 53149049 53157304 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2432 - - gmx:100808550 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2432 6 53149049 53157304 Lja6g2432 6 53149049 53157304 ECH
Lja4g4276 4 76409665 76411225 Lja6g2432 6 53149049 53157304 PCT