Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2411 ATGGCGTCCAACAACACCCTTCACCACCCACCTGACTCCCCCACCCGGCCTCTTACTCCGGCAACACCTCGTCGCCGCAAGAATCAAAACTCACCCATCGCCGCCATCATTCTTCGTCTGAATGGAACTCACCGCCGGAAATACTCAGCTCTCAGCTCCCCTGTCAATTTCAAACAAGGATTCCAGAAACGTGAGGCTTCAGCGAGGAAGCTCGCAGCTGGGTTGTGGAAGTTGCGGTTTCTGGAAGTCTCTGGCGGTGGCGGTGCTGATACCGGAGATGGGTCATTCTGCCACTCTCTGCCTAAGCAAGCTAAAGGGAATAATGTGAAGGGCACATCTCGTCATCGTCAAGATTCTGAAGAAAAATTCAAAGTAAGAAGGCCAGTAACCATTTTGCGTTCAAGAGATGGACTTAGATGTGAGCTTGAAACTTATATGCCATGTATCAATTTTTCAAAAGAGGAGGCTACAAAATGGAACCCTGCTCTTGAAGATGGGAAATTTGTAGGTGACCGTGACTCTGTTGTCACTGTTCTGCTAGAAGAACTCCTTCGAGCTCAACGGTCCATCAATAAGCTTAAAGCCGCACAAAAATCCTCTGAGAAAAATGTCAAACATTTTTTGCGAAATCTTGAAAGGGAAAAGGTCTTTTGGAAGCGCAGAGTGCGCCAGAAGATTGAAGCAATGTTAGATGACTTGAAGGATAAGTTGGCAAGGGAAAAAAGAAGTAGAGAGAGGATGGAGGTACTGAATACCAAATTGGGGCATGAACTGGCTATAGCTAACCTATCTGCAAAGCAGTTTATGGCGAACTACGAGAAAGAAAAGAAAGAAAGAGAGCTGAGAGAAGAAGTGTGTAATGAATTAGCCATGTATATAGGAGAAGGCGAGGCTAAGCTTGAAGAAATAATCAGAGATTCCATGAGAATTCGGGAGGAAGTGGAAGAAGAGAGAAAGATGATGCAAATGGCTGAGTTATGGCGTGAAGAACGCGTGCAGATGAAGCTAGCTGATGCAAAACTTTTTCTTGAAAATAAATACAATCAGCTGCTCCAATTGATAGCTTATCTGGAAATGTTCTTAAGATCAAGGGGTGCTGAACTAGACACCAGGGAACTAGAGGAAGCTGAATTGATCAAACAGGTAGTTGAATCAGTAAACCTTCAACGAATTGTGGAACTTTCCTATGATTTCTCAAAGTCAGATGATACATTTCCCATTTATGAGGAGCTGACAAAAGACAATGCAAATGAGAGAAGGATTAAACTAGATTCCCACACCACTCTTGCTGGCCCCTCATCCAAAATTCACATTGAAAGTCTTGAAGAAGGGTTGAATAAAAACTCTATTTTACATCAATTAAGTCCACAGAGTGATTATGATGTTGAGTGTCTGAAATTGAGCTCAGAACCACAAAGGGGAGACACCTATGTTATCAATGTTAACCAAGAGAGGAATAAATCAGAGAGTGAAGCAGAAAATAGTCCTGAATCTCTGAACAAAGGAACTATTGTTAATGGGGTGTATTATGTATCAAGAAGACAATCAAAGTGGAAAGCCAACCCTGCCTCTAAACAACTAAGGTCATACGCGCGCCCCAATGATGAAACAACGATTTCTTCTACAAAATCTTCTCAACATAGAAGGCAAGGTGATAGGACTTCTACTACTTCTCATTGTAAAGGTTCTGTTGAAGGAAACTCAAAGGATAACATGAACCCGCACATAGCTCGTGGGATGAAAGGATGCATAGAATGGCCACGAGGCATTCCAAAAGCTAATTCAAAGGTAATTCCTTTGGAAGAAAGAGTGAAAAGCCAGAAATCTCAGTTGCAACATGTTCTTAAGCCAAAGCCTTGTTAA 1863 0.4262 MASNNTLHHPPDSPTRPLTPATPRRRKNQNSPIAAIILRLNGTHRRKYSALSSPVNFKQGFQKREASARKLAAGLWKLRFLEVSGGGGADTGDGSFCHSLPKQAKGNNVKGTSRHRQDSEEKFKVRRPVTILRSRDGLRCELETYMPCINFSKEEATKWNPALEDGKFVGDRDSVVTVLLEELLRAQRSINKLKAAQKSSEKNVKHFLRNLEREKVFWKRRVRQKIEAMLDDLKDKLAREKRSRERMEVLNTKLGHELAIANLSAKQFMANYEKEKKERELREEVCNELAMYIGEGEAKLEEIIRDSMRIREEVEEERKMMQMAELWREERVQMKLADAKLFLENKYNQLLQLIAYLEMFLRSRGAELDTRELEEAELIKQVVESVNLQRIVELSYDFSKSDDTFPIYEELTKDNANERRIKLDSHTTLAGPSSKIHIESLEEGLNKNSILHQLSPQSDYDVECLKLSSEPQRGDTYVINVNQERNKSESEAENSPESLNKGTIVNGVYYVSRRQSKWKANPASKQLRSYARPNDETTISSTKSSQHRRQGDRTSTTSHCKGSVEGNSKDNMNPHIARGMKGCIEWPRGIPKANSKVIPLEERVKSQKSQLQHVLKPKPC* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2411 620 Coils Coil 176 196 - -
Lja6g2411 620 MobiDBLite consensus disorder prediction 556 570 - -
Lja6g2411 620 MobiDBLite consensus disorder prediction 1 32 - -
Lja6g2411 620 MobiDBLite consensus disorder prediction 517 545 - -
Lja6g2411 620 MobiDBLite consensus disorder prediction 515 574 - -
Lja6g2411 620 PANTHER - 29 599 - -
Lja6g2411 620 PANTHER GB|AAF24581.1 29 599 IPR043424 -
Lja6g2411 620 Coils Coil 208 250 - -
Lja6g2411 620 Coils Coil 297 320 - -
Lja6g2411 620 MobiDBLite consensus disorder prediction 98 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2411 Lja-Chr6 52951600 52954668 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2411 - - lja:Lj6g3v1876730.1 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2411 6 52951600 52954668 Lja6g2411 6 52951600 52954668 ECH