Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2322 ATGGCAGGTAGTGCTGATAGGAGACTGGGCGTGGCGGTGGATTTCTCACCATGCAGCATCAAGGCACTCAAATGGACGGTGGATAACGTTGTCAGAGAAGGCGATCACCTCATTCTTGTCATCATCCGCCCCCAAGAGTACTATGAGCGTGGCGAGATGCAGCTCTGGGAAACCACCGGCTCACCTCTTATACCACTGTCTGATTTTTCTGACACTGCGGTCTTGAAGAGATATGGGCTCAAACCTGAACCTGAAGTGATTGATATTGCCACAACTGCCTCCAAGGAGAAAAATATTGAGGTGCTGTTGAAGATCTATTGGGGAGATGCGCGCGAGAAGCTATTGGAAGCAATTGAACACATACCTTTGGACAGCATTATCATGGGGAACAGAGGCCTTGGCACTCTCAGAAGGGCCATAATGGGCAGTGTCAGCAACCATGTGGTGAATAACGCCTCCTGCCCCGTCACTGTGGTGAAGAGTTCAGAACAACGCCATTAA 501 0.501 MAGSADRRLGVAVDFSPCSIKALKWTVDNVVREGDHLILVIIRPQEYYERGEMQLWETTGSPLIPLSDFSDTAVLKRYGLKPEPEVIDIATTASKEKNIEVLLKIYWGDAREKLLEAIEHIPLDSIIMGNRGLGTLRRAIMGSVSNHVVNNASCPVTVVKSSEQRH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2322 166 CDD USP_Like 8 159 - -
Lja6g2322 166 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 161 - -
Lja6g2322 166 PRINTS Universal stress protein signature 6 24 IPR006015 -
Lja6g2322 166 PRINTS Universal stress protein signature 120 132 IPR006015 -
Lja6g2322 166 PRINTS Universal stress protein signature 138 160 IPR006015 -
Lja6g2322 166 PANTHER IMP2'P 6 165 - -
Lja6g2322 166 Pfam Universal stress protein family 7 160 IPR006016 -
Lja6g2322 166 Gene3D HUPs 2 166 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2322 Lja-Chr6 52113363 52115175 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2322 - - gmx:100816534 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2322 6 52113363 52115175 Lja6g2322 6 52113363 52115175 ECH