Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2299 ATGGTGGTGGCTCGCGACATAGACGATTTTCCCAAGAACGATGCCAACTACACTTCCTTAACACCGCTCTGGTTCCTGGAAAGAGCTGCTCTGGTGCACCCCACCAGACCATCGGTGGTGCATGGATCACGCCGCTACACGTGGCAACAGACTTACCACCATTGCCGTCGTTTCGCCTCCGCTCTTTCTAACCGTTCCATCGGTCCCGGCAACACTGTAGCTGTTATTGCACCTAATGTTCCAGCCCTCTATGAAGCTCATTTTGGAATTCCAATGGCAGGAGCTGTGCTGAACACTTTTAATATTCGGTTAAATGCATCAACAATAGCATTTCTTCTTGGTCATTCATCAGCAGCAGTGGTGATTGTGGATCAAGAGTTCTTTTCCTTGGCAGAAGAGGCTTTGAAAATCTTGTCTGAGAAAAGCAAAAGCTTCAAACCTCCAATTTTAATTGTCATTGGTGACGAAAACTGCGACCCTAAGGCGCTCAGAGATGCTTTGGACAAAGGAGCCATTGAATATGAGAAGTTTCTTGAGAGTGGCGATCCTGAATATGCGTGGAAACCTCCCGAGGATGAGTGGCAGAGCATTGCTTTGGGTTACACATCTGGTACAACTGCTAGTCCTAAAGGTGTGGTATTACACCACCGAGGGGCATATCTTATGGCTCTAAGTGGAGCTCTAATTTGGGGGATGAATGAAGGTGCTATATACCTGTGGACACTACCCATGTTTCATTGCAATGGCTGGTGTTATCCTTGGACACTTGCAGCTCTTTGTGGGACAAACATCTGTCTCCGGCAGGTAACAGCTAAGGCAGTATATGCAGCCATTTCCCAGTACAAAGTGACTCATTTTTGTGCAGCACCAGTGGTGCTTAATTCAATAGCCAATGCCTCTCCTGAGGAAGCTATCCTTCCTCTACCTCATGTTGTAAACGTTAATACAGCCGGGGCAGCTCCTCCTCCATCTGTGATTGCCGCCATGTCAAAACTAGGATTTCGCGTAACTCACACTTACGGTCTCTCAGAAACTTATGGCCCCTCCACGGTATGTGCCTGGAAGCCAGAGTGGGAGACACTCCCTCCTGAACAGCAAGCTAAGCTCAATGCAAGGCAAGGGGTGCGGTACATTGGCTTGGAAGGCCTAGAGGTTATGAACACAAAAACTATGCAACCCGTCCCGTCTGATGGTGCTACCGTTGGTGAAATCGTGATGCGGGGTAATCTCGTGATGAAAGGATACTTAAAGAACCCTAAAGCTAATGAGGAAAGTTTTGCAAATGGATGGTATCATTCTGGTGATCTTGCTGTGAAGCACCCTGATGGGTATATAGAGATTAAAGACAGGTCAAAGGACATCATCATCTCTGGTGCTGAGAATATCAGCAGTGTTGAAATAGAGAATGCTCTGTACTCTCATCCTGCAATACTGGAAGCTGCAGTGGTTGCTAGGCCAGATGAGAAATGGGGTGAGTCTCCCTGTGCTTTTGTGACACTGAAGCAGGGAGTGGATAGTAGTAATGAGAAGCGTCTGGCTGAAGATGTAATTAAGTTCTGCAGGTCCAAAATGCCTGCTTATTGGGTCCCAAAATCAATTGTGTTTGGACCGTTGCCAAAGACTGCTACTGGGAAAACGCAGAAGCATTTGCTCAGGGCCAAGGCAAAAGAGATGGGGCCTGTCGGGGTGAGCAAGTTGTAA 1701 0.4756 MVVARDIDDFPKNDANYTSLTPLWFLERAALVHPTRPSVVHGSRRYTWQQTYHHCRRFASALSNRSIGPGNTVAVIAPNVPALYEAHFGIPMAGAVLNTFNIRLNASTIAFLLGHSSAAVVIVDQEFFSLAEEALKILSEKSKSFKPPILIVIGDENCDPKALRDALDKGAIEYEKFLESGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSGALIWGMNEGAIYLWTLPMFHCNGWCYPWTLAALCGTNICLRQVTAKAVYAAISQYKVTHFCAAPVVLNSIANASPEEAILPLPHVVNVNTAGAAPPPSVIAAMSKLGFRVTHTYGLSETYGPSTVCAWKPEWETLPPEQQAKLNARQGVRYIGLEGLEVMNTKTMQPVPSDGATVGEIVMRGNLVMKGYLKNPKANEESFANGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENALYSHPAILEAAVVARPDEKWGESPCAFVTLKQGVDSSNEKRLAEDVIKFCRSKMPAYWVPKSIVFGPLPKTATGKTQKHLLRAKAKEMGPVGVSKL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2299 566 Gene3D - 6 452 IPR042099 -
Lja6g2299 566 CDD ttLC_FACS_AEE21_like 17 553 - -
Lja6g2299 566 Pfam AMP-binding enzyme C-terminal domain 466 545 IPR025110 -
Lja6g2299 566 PANTHER ACYL-ACTIVATING ENZYME 3 566 - -
Lja6g2299 566 Gene3D - 453 560 IPR045851 -
Lja6g2299 566 SUPERFAMILY Acetyl-CoA synthetase-like 14 557 - -
Lja6g2299 566 Pfam AMP-binding enzyme 27 457 IPR000873 -
Lja6g2299 566 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 3 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2299 Lja-Chr6 51939621 51942835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2299 5 566 Miscellaneous Gene Families AT3G16910 74.067 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2299 K01913 - gmx:100811706 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2299 6 51939621 51942835 Lja6g2299 6 51939621 51942835 ECH