Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2296 ATGGCAGAGTGTAACAGGGAAGACTATTTCACTGCCCCGAATGTTGAGACAACATCCACGGCTAAGAAGTACGGTGGGCTTGTCCCAAAGAAGAAGCCTTTGATATCCAAAGACAATGAAAGGGCATTCTTTGATTCAGCAGACTGGGCATTATGCAAGCAAGGTGCTGGGGTGAATCAACAATCTACTGCAGCTGTAGAAACTCTGAGACCAAAACTCCAGAGAACTCCACATCAACAACTTCCCCCCAGACGACCTGCATGCACATCTGGTTGA 276 0.4746 MAECNREDYFTAPNVETTSTAKKYGGLVPKKKPLISKDNERAFFDSADWALCKQGAGVNQQSTAAVETLRPKLQRTPHQQLPPRRPACTSG* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2296 91 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 16 88 IPR006760 -
Lja6g2296 91 MobiDBLite consensus disorder prediction 70 91 - -
Lja6g2296 91 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN 1 91 - -
Lja6g2296 91 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2296 Lja-Chr6 51896068 51899331 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2296 - - mtr:MTR_2g034750 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2296 6 51896068 51899331 Lja6g2296 6 51896068 51899331 ECH