Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2268 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGAGCAGCGGTGATGCTGTACTACGTGAGCCGGAGGCTCGCCAGGAAGGAGGTGGAGGATGAGGATCACTCCGGCGATGATGATTTGTCGAAATCGAGTAGATCGCTTCGCCGGAGGAGGATCTCACGGCGGCCGGCTCAGGCGCCGGCGACGCTGCTTGAATCGATCGTTACGTTGTCGGAGACGTTGAGGTTCACGTACTCTGAGACGCTTGGGAAGTGGCCTATTGGTGATTTGGCGTTTGGGATCAACTACTTCATGAGGAAGCAGGGTAATTTGCAAGTTGCTAGTGTGTATGCTGGGAGTGATTGTGTACAACTCAAAGGGGATGAAATAATTGTGGAGTTATATGAGTTATTGAGGCTGTTGACACTGTGCATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTTTTGGATTCTGCTGGATTAACCCTGGATGATGTGCTCTTGCAGAAGCCTAAAGCTGCGCTTCTGAAGCCTGCTTTCACAATAATACGTGATGAACAGTCAAAATGTTTACTTCTATTGATCCGGGGTACTCACAGCATTAAAGACACGCTGACAGCTGCAACTGGTGCTGTTGTGCCCTTTCACCATTCGGTTTTAACTGATGGTGGGATAAGCAACTTGGTTTTAGGGTATGCACACTGCGGTATGGTTGCTGCTGCTCGTTGGATTGCAAAGCTCTGCACTCCTACCCTACTTAAGGCTCTTGGTGAATGTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTATTAACATATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACTTGTGTCACATTTGCCCCAGCTGCGTGTATGACATGGGAGTTAGCAGAATCGGGAAAGCACTTTATCACTACCATCATAAATGGTTCTGACTTAGTGCCCACATTCTCAACTTCCTCAATTGATGATCTCCGATCTGAGGTCACTGCATCGTCTTGGTTAAATGATTTACGGGACCAGGTTGAACAGACAAGGGTCCTAAATGTTGTATACCGCTCAGCAACTGCACTTGGATCTCGCCTACCATCTATATCCAGCGCAAAAGCTAGGGTTGCTGGTGCTGGTGCTATTTTGAGGCCAGTAACCAGTGGCACTCAGGTTGTGATGAAACGTGCACAAAGTGTTGCTGAAGCTGTTGTCAGAACTCGATCATCGTTGTCATCATGGTCTTGCATGAGTGCACGCCGCCGAAATGTTAGTTCATCGCCAAATTCTAAAACAGAAGTCTTAAGCGAAACTTCTCTAATAATAGCTGATACGTGTACGAAATCTCTTTTGACCGAAGAGACAGTAAGTGATTCTCTGCTTAAGGACGAACATAGTTCCTCAAGTGGAGGATCTGGCCATGACGACACAGATGAAGAGGAACAGCTCATTCCTGCTAACCAAGACGTTACCACATCCACTGTAGATGACATAACAGAAGGGCAGCTATGGTATGAGTTGGAGAAAGAGCTTCAAAAACAGGAAAGTACCATAAACATTCATGCTCAGGAAGAAGAAGCTGCAGCAGCAAAAGAGATTACTGAAGAAGAGAATCAGCTTGTTGATGCTGCAGAATGCAGTGATTCAATCACAACAACTGAGAACTTGGACAATCATCGATTTTATCCCCCAGGAAGAATCATGCATATTGTTTCTGTACCTTCTTCGTCTGATGATTCAAATTCAGATTCTGATAATCCTCCTGTAGAGGAACATGTCTGCTTATATGAAACACCTAGAGAGTTGTACAGCAAGCTCAGGCTTTCAAGAACGATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATCCGAGAACTAGAGAAAGATAGTAGCTGTAATACTATAAGAATTTAA 1929 0.4546 MAAGTMATAAGAAVMLYYVSRRLARKEVEDEDHSGDDDLSKSSRSLRRRRISRRPAQAPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLQVASVYAGSDCVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGLTLDDVLLQKPKAALLKPAFTIIRDEQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLTDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEQTRVLNVVYRSATALGSRLPSISSAKARVAGAGAILRPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVSSSPNSKTEVLSETSLIIADTCTKSLLTEETVSDSLLKDEHSSSSGGSGHDDTDEEEQLIPANQDVTTSTVDDITEGQLWYELEKELQKQESTINIHAQEEEAAAAKEITEEENQLVDAAECSDSITTTENLDNHRFYPPGRIMHIVSVPSSSDDSNSDSDNPPVEEHVCLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDSSCNTIRI* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2268 642 Gene3D alpha/beta hydrolase 156 354 IPR029058 -
Lja6g2268 642 SUPERFAMILY alpha/beta-Hydrolases 160 323 IPR029058 -
Lja6g2268 642 MobiDBLite consensus disorder prediction 29 53 - -
Lja6g2268 642 CDD Lipase_3 176 327 - -
Lja6g2268 642 Coils Coil 518 538 - -
Lja6g2268 642 MobiDBLite consensus disorder prediction 456 493 - -
Lja6g2268 642 Pfam Lipase (class 3) 185 321 IPR002921 GO:0006629
Lja6g2268 642 Pfam Lipase 3 N-terminal region 50 124 IPR005592 GO:0016042
Lja6g2268 642 MobiDBLite consensus disorder prediction 29 45 - -
Lja6g2268 642 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 635 - -
Lja6g2268 642 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2268 Lja-Chr6 51557701 51562605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2268 1 635 Acyl Lipid Metabolism Gene Families AT4G16070 66.817 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2268 - - gmx:100782138 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2268 6 51557701 51562605 Lja6g2268 6 51557701 51562605 ECH