Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2252 ATGCTACCATCTTCCAGGTTCGATAGAGCTTCCAGCTTGAAGGACAGAGAGCACGATACCCTCTCTTTTTACCGCAATGAGCTGATCTCTCTTCTCTCCAGGTATGTAGCTCGAGGTAAAGGAATACTGCAACCACATGATCTGCTGGATGAGGTGGAAACGATTGTAAAAGAGAATGAAGGCATGCACAAACTCAAAGATAGCCCCTTTGTCAAAGCGCTAGAATCTGCAAAGGAAGCTATAGTTCTACCTCCTTTAGTATCTATAGCTTTGCGTCCAAGACCTGGTGTTTGGGAGTATATTCGTGTTAACGCCTTCGAACTCAATGTGGATAATCTAAGTGTTTCTGAATATCTCCGATTCAAAGAAGAACTTGTAGATGGAGAGTGCAGTGACAATTTTGTTTTCGAACTAGACTTTGAACCATTTAATGCAACTTTTCCTCGACCTACTCGATCATCCTTTATTGGCAATGGGGTACAATTTCTCAACCGTCATCTGTCATCACTCATGTTCCGTAACAAAGAAAGTTTGGACCCTCTCCTCGAATTCCTTCGTACACATAGATATGATGGCTGTACAATGATGCTAAATGATAGCATTCATGACATATCCAAGCTCCAGACTTCCTTGGCAAAGGCAGAAGAATTCCTTACCAAGCTCCAACCAAGTACACCATATTCTGAATTTGAATACGAGCTACAAGGATTGGGATTTGAGAGAGGTTGGGGTGATACAGCCCAGAGGGTGTTAGAAATGGTGCATCTTCTCCTAGACATCTTTCAGGCTCCTGATCCCAGCACCTTAGAGACATTTCTAGGAAGAATTCCTATGGTTTTCAATGTTGTAATTGTATCACCACATGGTTACTTTGGGCAAGCAAATGTCTTAGGTTTGCCTGATACTGGTGGGCAGGTTGTTTATATACTTGATCAAGTGCATGCTTTGGAAAATGAGATGCTACTCAGAATTCAAAAGCAAGGACTTGATGTGTCTCCAAAAATTCTGATAGTTACAAGATTGATACCAGAGGCCAAAGGGACAACATGCAATCACAGACTGGAAAGAGTTAGCGGAACTCAGCACACATATATATTGCGAGTACCTTTTAGAAGTAAGAATGGAATTTTGAGAAATTGGATTTCAAGGTTTGACGTGTGGCCTTATCTCGAGACATTTGCAGACGATGCATCAAACGAAATAGCGTCTGAGTTACGAGGAGTTCCAGATCTGATCATTGGCAACTACAGTGATGGAAATCTTGTTGCAACCTTATTATCTTATAAGCTAGGAATCACACAGTGCAACATAGCCCATGCATTGGAGAAGACAAAGTATCCAGACTCTGATATATATTGGAAAAAGTATGAAGACAAGTACCATTTTACTTGTCAATTCACAGCCGACCTTATTGCAATGAACAATTCAGACTTTATAATCACTAGTACATACCAAGAAATTGCAGGAAGCAAGAATAATGTTGGACAATATGAGAGCCACACTGCCTTCACTCTTCCAGGACTGTACCGCGTTGTTCATGGCATTGATGTTTTTGATCCCAAGTTCAATATCGTGTCTCCAGGTGCAGATATGTGCATTTATTTCCCATATTCAGAGAGAGAAAAGAGACTAACTTCTCTACATTGTTCAATTGAAAAACTGCTATATGGTGCTGAACAGAATAAAGAACACATTGGCTTGCTAAGTGATCGATCAAAGCCCATTATCTTTTCTATGGCAAGACTTGATCGAGTGAAAAATTTGACAGGGCTTGTTGAATGTTTTGGCAAAAGCTCCAAGCTGAGAGAGCTTGTGAATCTTGTGGTGGTGGGTGGTTATATTGATGTACAGCAATCTCGGGACAGAGAAGAGATGGGGGAGATAGAGAAAATGCATGGCCTCACAGAAAAATACAACTTACATGGCCAGTTTCGTTGGATAAAGGCCCAAATGAATCGTGCTCGCAATGGGGAGCTCTACCGATATATTGCTGATGTGAAAGGTGCTTTTATACAGCCTGCTTTGTATGAAGCGTTTGGCCTAACAGTTGTGGAAGCTATGATTTGTGGTCTTCCTACATTTGCCACTTGTCACGGTGGCCCTGCTGAGATAATTGAGCATGGCATTTCTGGATTCCATATTGATCCACATCACCCTGATCAGGTTGCTCAGGTTTTAGTGAACTTCTTTGAGCAATGTCAGCATGATCCTGGATACTGGAATAAGATTTCTGATGCAGGGATTTGCCGCATCCATGAGAGGTATACATGGAAGATATATTCTGAGAGGCTCCTAACTTTAGCTGGTGTTTATGGCTTCTGGAAGCATGTGTCTAAACTAGAGAGGAGAGAAACCAGGCGGTACTTGGAGATGTTTTACATTCTCAAATTCAGGGATTTGATAAAATCGATCCCACTAGCAGTCGATTAG 2430 0.4156 MLPSSRFDRASSLKDREHDTLSFYRNELISLLSRYVARGKGILQPHDLLDEVETIVKENEGMHKLKDSPFVKALESAKEAIVLPPLVSIALRPRPGVWEYIRVNAFELNVDNLSVSEYLRFKEELVDGECSDNFVFELDFEPFNATFPRPTRSSFIGNGVQFLNRHLSSLMFRNKESLDPLLEFLRTHRYDGCTMMLNDSIHDISKLQTSLAKAEEFLTKLQPSTPYSEFEYELQGLGFERGWGDTAQRVLEMVHLLLDIFQAPDPSTLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVHALENEMLLRIQKQGLDVSPKILIVTRLIPEAKGTTCNHRLERVSGTQHTYILRVPFRSKNGILRNWISRFDVWPYLETFADDASNEIASELRGVPDLIIGNYSDGNLVATLLSYKLGITQCNIAHALEKTKYPDSDIYWKKYEDKYHFTCQFTADLIAMNNSDFIITSTYQEIAGSKNNVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEREKRLTSLHCSIEKLLYGAEQNKEHIGLLSDRSKPIIFSMARLDRVKNLTGLVECFGKSSKLRELVNLVVVGGYIDVQQSRDREEMGEIEKMHGLTEKYNLHGQFRWIKAQMNRARNGELYRYIADVKGAFIQPALYEAFGLTVVEAMICGLPTFATCHGGPAEIIEHGISGFHIDPHHPDQVAQVLVNFFEQCQHDPGYWNKISDAGICRIHERYTWKIYSERLLTLAGVYGFWKHVSKLERRETRRYLEMFYILKFRDLIKSIPLAVD* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2252 809 Pfam Glycosyl transferases group 1 561 733 IPR001296 GO:0016757
Lja6g2252 809 Gene3D Glycogen Phosphorylase B; 283 800 - -
Lja6g2252 809 Gene3D - 26 148 - -
Lja6g2252 809 TIGRFAM sucr_synth: sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Lja6g2252 809 Gene3D Glycogen Phosphorylase B; 530 757 - -
Lja6g2252 809 CDD GT4_sucrose_synthase 281 766 - -
Lja6g2252 809 PANTHER - 10 809 IPR012820 GO:0005985|GO:0016157
Lja6g2252 809 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Lja6g2252 809 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Lja6g2252 809 PANTHER SUCROSE SYNTHASE 2 10 809 - -
Lja6g2252 809 Gene3D - 149 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2252 Lja-Chr6 51449408 51455917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2252 2 809 Glycosyltransferase AT4G02280 74.134 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2252 K00695 - gmx:100788717 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2252 6 51449408 51455917 Lja6g2252 6 51449408 51455917 ECH