Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2251 ATGGCGAAGAATCCATCTGACCCAGCTACTCACCATTTCAACCACGACTCTCTGCTCCGCTTCTGCTCTTCCAACATTTCCGGCTTCCCACCTTCCCCCACACATTTCAACCTCTCCCAGTTTGGACATGGACAGTCCAACCCCACCTACTTGATGGAAGTAGGCTCACACGGCTCTGTGGTCAAGCGCTACGTTCTCAGGAAGAAACCTGCAGGGGTGTTACTGGCTTCAGCTCATGCTGTGGAAAGAGAGTTTATGGTTCTCCAGGCGTTGGGAGCTAACACGAAAGTTCCGGTTCCTAAAGTTTTCTGTTTGTGCAATGATCCATCTGTTATTGGAACAGCTTTTTACATTATGGAGTATTTGGAGGGGCGCATATTTGTTGATCCCAAGCTACCAGGTATGGCACCAGAGAGGAGGAGGGCGATTTACCTGGAAACTGCGAAAGCCTTAGCTTCTTTACATTCTGCTAATGTGGACTCCATTGGTCTGGGAAAATATGGGCGTCGTAATGATTATTGCAAAAGACAAATTGAGAGGTGGGCTAAGCAATATATTGCCTCAACCAGTGAGGGTAAACCTGCAACGAATCCAAAAATGTTTGCCCTGGTTGATTGGCTAAAGCTCAACATCCCTCTTGAAGATTCTTCAGGAGCAACAGCTGGTCTGGTTCATGGAGATTTTCGTCTTGACAATCTTGTGTTCCATCTCACAGAGGATCGAGTAATTGGGGTACTTGACTGGGAACTGTCTACCCTTGGTAACCAAATGTGCGATGTCGCATATAGCTGTCTGTCTTATATTGCAGATATTGGGCCAGAAATAGTACGGGAAGGTATGGAACTATCTGGGGCACCAAAGGGAATTCCTTCACTACCAGAATATTTGGCTGAGTACTGCTCTCTGGCAGAACGAAAATGGCCTCTTGCTGAATGGAAGTTCTATGTTGCCTTTTCTTTGTTCCGTGGGGCTTCAATTTATGCAGGCGTGTATAATAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCGCGTCATACAGAAGTACTTGCTAATGGTCTTATAGATGCTGCTTGGAAATTTATTGAACGCAAATCTGTGCTTCCACAGCATCCTCCCTCAGATGCAAACGCACGTGACCATTCAAAAGAGTTAGTGAATGGGGATGATATGCTGGGGCTATCAAATCAGGGGAAGTTTGTTCCTAGCCAAAAGGTTTTAAACCTCAGGAACAAATTAATTCAGTTTATGGAGGAACACATATACCCCATGGAAAATGAGTTTTATAAACTCGCCCAGTCAGAATCACGTTGGACCGTTCACCCTGCAGAGGAAAAGTTAAAGGAGTTAGCAAAGAAAGAAGGCTTGTGGAACTTATTTATTCCTCTTGACAGTGCTGCGAGGGCAAAAAATCTTATTTTTGATGGGAGCAATAATAGTCCCTCTACTGATGCAAATGACTTGTTATTGGGTGCTGGTCTAACAAATCTCGAATATGGATATCTTTGTGAGACCATGGGTCGCTCTGTTTGGGCTCCACAAGTATTTAACTGTGGTGCACCTGATACAGGTAATATGGAGGTATTACTGCGTTATGGAAATAAAGAGCAACAACGAGAATGGCTTATTCCTTTGCTTGAGGGGAAGATTAGGTCTGGATTTGCAATGACAGAACCTCGTGTTGCGTCTTCTGATGCAACCAATATTGAGTGTTCGATCAAAAGACAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGTGGTGCCATGGATCCAAGATGCAGAATTCTTATAGTCATGGGTAAAACTGACTTCAATGCAGCGAAGCATAAACAGCAATCTATGATCTTAGTTGATATCCAGACTCCTGGTGTTCATATAAAGAGACCATTGTTGGTGTTTGGCTTTGATGATGCACCTCATGGGCATGCAGAAGTAACATTTGAGAATGTACGTGTGCCAGCAGAAAATATCTTACTTGGTGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTAGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGCTGCTGAGAGAGGCATGCAAATGATGGCTCAAAGAGCTGTTTGCAGAAGAGTATTTGGGAAATTGATTGCTCAACAGGGCTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTAGAGAAGACCAGATTGTTGGTGTTGGAAGCTGCGGACCAACTAGATAGACATGGGAACAAGAAAGCTCGAGGGATATTAGCAATGGCGAAGGTAGCCGCACCAAACATGGCACTAAAAGTACTTGACATGGCAATGCAAGTGCATGGAGCTGCTGGTGTGTCTTCTGATACAGTTCTGGCGCATCTGTGGGCAACTGCAAGGACCCTAAGAATTGCAGACGGTCCAGATGAAGTCCACTTGGGTACCATTGCCAAGTTAGAACTACAGAGAGCCAAGCTCTGA 2472 0.449 MAKNPSDPATHHFNHDSLLRFCSSNISGFPPSPTHFNLSQFGHGQSNPTYLMEVGSHGSVVKRYVLRKKPAGVLLASAHAVEREFMVLQALGANTKVPVPKVFCLCNDPSVIGTAFYIMEYLEGRIFVDPKLPGMAPERRRAIYLETAKALASLHSANVDSIGLGKYGRRNDYCKRQIERWAKQYIASTSEGKPATNPKMFALVDWLKLNIPLEDSSGATAGLVHGDFRLDNLVFHLTEDRVIGVLDWELSTLGNQMCDVAYSCLSYIADIGPEIVREGMELSGAPKGIPSLPEYLAEYCSLAERKWPLAEWKFYVAFSLFRGASIYAGVYNRWVKGNASGGERARHTEVLANGLIDAAWKFIERKSVLPQHPPSDANARDHSKELVNGDDMLGLSNQGKFVPSQKVLNLRNKLIQFMEEHIYPMENEFYKLAQSESRWTVHPAEEKLKELAKKEGLWNLFIPLDSAARAKNLIFDGSNNSPSTDANDLLLGAGLTNLEYGYLCETMGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQQREWLIPLLEGKIRSGFAMTEPRVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDIQTPGVHIKRPLLVFGFDDAPHGHAEVTFENVRVPAENILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQMMAQRAVCRRVFGKLIAQQGSFLSDMAKCRIELEKTRLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALKVLDMAMQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIAKLELQRAKL* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2251 823 Gene3D - 553 667 IPR046373 GO:0016627
Lja6g2251 823 SUPERFAMILY Protein kinase-like (PK-like) 35 338 IPR011009 -
Lja6g2251 823 Pfam Acyl-CoA dehydrogenase, middle domain 554 655 IPR006091 GO:0016627
Lja6g2251 823 Gene3D - 124 367 - -
Lja6g2251 823 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 7 823 - -
Lja6g2251 823 Pfam Acyl-CoA dehydrogenase, C-terminal domain 667 815 IPR009075 GO:0016627
Lja6g2251 823 Gene3D - 402 551 IPR037069 GO:0016627|GO:0050660
Lja6g2251 823 CDD ACAD10_11_N-like 37 303 IPR041726 -
Lja6g2251 823 Pfam Acyl-CoA dehydrogenase, N-terminal domain 409 550 IPR013786 GO:0016627|GO:0050660
Lja6g2251 823 Gene3D - 668 822 - -
Lja6g2251 823 Pfam Phosphotransferase enzyme family 39 284 IPR002575 -
Lja6g2251 823 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 402 680 IPR009100 GO:0016627
Lja6g2251 823 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 7 823 - -
Lja6g2251 823 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 665 819 IPR036250 GO:0016627
Lja6g2251 823 Gene3D Phosphorylase Kinase; domain 1 15 123 - -
Lja6g2251 823 ProSiteProfiles Protein kinase domain profile. 35 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2251 9 821 Acyl Lipid Metabolism Gene Families AT3G06810 75.153 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2251 K00249 - gmx:100788184 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2251 6 51438324 51445852 Lja6g2251 6 51438324 51445852 ECH