Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2244 ATGATGGTGGGTCTGAGTGTGGTGTTGGAAGCACAGAAGGGTGGTGGTGTTAGCAAGGAGACACCCCAAGTGATTAACAAAACCATGATGCTAAGCAGCAGCAGCAGCATCAACAAACACTCTTCTTCTTCTTTTTCTTCTTCTTCTATGTCCTGGAATTCCCAGCACTCAGCTTTTCAAGAACCAGCTTTTCTAGAGCTCTGTTTTCTCTGCAGGAAGAGGCTGATGCAAGGGAAAGACATTTACATGTACAAAGGGGACAGAGCTTTCTGTAGCGAGGAGTGCAGGTGCAAGCAGATTTTCATGGATGAGGAAGAGACTGTTCAGACAGAAAACTGCTCCATGGCTGCAATGAGACCCACATCCTCTGCCTCCTCCTCTGTTTCTTCTTCTTCTTCAACTCCTCATCGTAAGAAAGGATCAAGAAACAGAAGGGGTGGTTTTGCTTACTGA 453 0.4614 MMVGLSVVLEAQKGGGVSKETPQVINKTMMLSSSSSINKHSSSSFSSSSMSWNSQHSAFQEPAFLELCFLCRKRLMQGKDIYMYKGDRAFCSEECRCKQIFMDEEETVQTENCSMAAMRPTSSASSSVSSSSSTPHRKKGSRNRRGGFAY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2244 150 PANTHER FCS-LIKE ZINC FINGER 15 2 150 - -
Lja6g2244 150 Pfam zinc-finger of the FCS-type, C2-C2 55 105 IPR007650 -
Lja6g2244 150 MobiDBLite consensus disorder prediction 119 136 - -
Lja6g2244 150 PANTHER FCS-LIKE ZINC FINGER 5 2 150 - -
Lja6g2244 150 MobiDBLite consensus disorder prediction 119 150 - -
Lja6g2244 150 ProSiteProfiles Zinc finger FLZ-type profile. 63 107 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2244 Lja-Chr6 51380488 51381597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2244 - - twl:120003617 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2244 6 51380488 51381597 Lja6g2244 6 51380488 51381597 ECH