Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2242 ATGAGTGAAGACTCGAAGAAGAACATTCTCGGAGCTCCTCCACCGGCGAGGCACAACAACTCCGATGACATCAAACCCCCACTCTCACCGCCACCTGCCCCCACCAAGAAAATCATCATCAAGAGTGCCGACATGTTGCCCGACATGCAAAAAGAGGCTGTCGATGTCGCCGTCAAGGCGTTTGAGAAGTACAATGTGGAGAAGGATGTTGCTGAGCAGATAAAGAAGGAGTTCGATAAGAGGCATGGTCCCACTTGGCATTGCATCGTTGGTCGTAATTTCGGCTCATATGTGACTCATGAAACAAACCACTTCGTTTACTTCTATTTGGATCAGAAAGCGGTCTTACTTTTTAAATCTGGCTAG 366 0.4809 MSEDSKKNILGAPPPARHNNSDDIKPPLSPPPAPTKKIIIKSADMLPDMQKEAVDVAVKAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2242 121 SMART Dynein_light_2 33 120 IPR001372 GO:0007017|GO:0030286
Lja6g2242 121 SUPERFAMILY DLC 34 121 IPR037177 GO:0007017|GO:0030286
Lja6g2242 121 Pfam Dynein light chain type 1 37 120 IPR001372 GO:0007017|GO:0030286
Lja6g2242 121 PANTHER DYNEIN LIGHT CHAIN 4 121 IPR001372 GO:0007017|GO:0030286
Lja6g2242 121 ProSitePatterns Dynein light chain type 1 signature. 87 101 IPR019763 GO:0005875|GO:0007017
Lja6g2242 121 MobiDBLite consensus disorder prediction 1 33 - -
Lja6g2242 121 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 34 121 IPR037177 GO:0007017|GO:0030286
Lja6g2242 121 PANTHER DYNEIN LIGHT CHAIN 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2242 Lja-Chr6 51352007 51361338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2242 K10418 - gmx:100777142 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2242 6 51352007 51361338 Lja6g2242 6 51352007 51361338 ECH