Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2234 ATGAGGAGAAGTTTGGGTATCCATGTGAAAAGGTTTCTAACAAGAAATTGGGAGATAGGGTTTGTGCTAAGGAATGAGAAGAGTACCCACCCCTTCACGATTATGTTATTGAGGGATGTACCAAATACCAAGTGTGTATCTTCTACTTCAGTTCAACATGAACCAAGATTCAAAAACTGCAATACGGACTCAAAAAGTTTCATCGATATTGCTGAATATGAAGGTCAAGAGAAAGCCCTCAAACAATTGAATTCAGTTCAGTGTCACTACAAAAAGCAACAAACAATTTCAGACCAAATATGCCTCAAGGATTTGTTCAAAGAATCTAAAACAGCAGCATCAGTAGATTCATGCTATGGCGATTTCAGAGACAAAAGGGACCTGGAAAAAGTGGACGACAGAAATTTTCACATCAGAACCACAATAACAAAAGCAGATGATCTACAACCTGAAACATATGACAGGAAGCTACATCAAAACCCTGGTTTGCCTCAAGCTCCTCAATATCCAACGCAAGAAGAGTTATATGAAAGAAGCATAATTAAGCTTGATTCTAGCAGATTTACCTGGTCCATAGAAGATGTTACTTTATCTATCTCGAAGAACATAGATGAAACAAGAAATATAATTTTCCATGCAGAGGATGAATTAATTGAGGAAGCATTGCAGCCACTAAAATTCCATCTCTTTGATCATGCAACAACTGCTGGCAAACATAGGCTCAGCCAGATAAGTCATCAAGAAAGTTCTAAGACAGAATTGGAAACATTATATAGTCTACTAAACTTCAATGAAGTTTGTTCAAAATCCAGAAGATTTTCCTTGCATGCCCTTAGAAGAATTTCAGGACTACAATATTCAAAGGCATTAGGAAAAAGTGGTGAAGAACATACTGTAGACATTGCAACTATTTATGAGAGTTTGATTATAGCTATCTCTACCTCCAAAGAGGAAAAAGAACTAAGGGCTTCAGTATCTATTCTGACAACAATAGTTTCAAGGAACAAGTCAATTATAGAAGATGTCAAGAAGAAAGGTTTAAGGTTGTGTGATCTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTGATATATTTGATAAATCCATCTCCTATAGATATAAAAACATTGGAACTTCTGCCAATACTAGTGGAGATTGTTTGCAATTCAAATGGTTACAAGAGTAAGCCAGAGTCACTGCATCTGACACCGCATGCAGCATCGTTGATGATCATTGAAGAACTAGTAACGTCATTTGACTATGCGACAAATAACATGCATTTGGCCACAATCAGTTCCCCTCATGTTCTGAATGGACTTCTAGAATTTGCTAGAAATGATAATCTAGAACAATTTTTTTCTTTGACCACCATTCTTATAAAATGCATGCAGTTTGATGCACAATGCAGAAAGTATGTTTCACAATTCACTCCTCTTGCTCCCTTCATCCACCTTCTACAGACGGAAAACACCCGTGCCAAATGCATGGCACTTGAATTTTTTCATGAAATCCTTTGTGTACCAAGATCATCAGCTATTAGTCTGCTACAACGTATACTGCAAGAAGGAGGCATCAATATTAAGCAGATACTAATGCATTGTGCCCATCAATTACAACCTGAACACCAGATTTTAGCAGCTAATATATTGCTTCAGTTAGACACGTTGAACTCATCTGATAAAAGCTTGTTCAGAGAAGAAGCAGTGCAGATCCTAGTCAGCGCAATGACATCTGTTGAAAGCTCAGAACAGACATTATCTGCATCCATTCTATCAAATCTTGCTGGAACATATGCTTGGACAGGGGAACCATATACAGTTGCATGGTTGCTGAGAAAGGCAGGCTTAACGTCTTCATATCATCAGAATATGATAAGAAACTTCAACTGGTTGGATCAGAATCTGCAGGATACCAGCATAGACTTATGGTGCAGTAAAATTGCCAAATGTATCATAAGTGTTGGGGATTCCATCTTCCATGCTTTAGAAAAAGGGTTAAGAAGCAAGGTGAAAAGGGTTTCTAGAGACTGCCTTGTAGCCGTTGCATGGCTTGGATGCCAAATATCAAAAAGCCCAGACAGCCTCAGTTATTCTTCATCTGAGATTATACTAAGTGGAATTCAGCAATTTCTGCATCCTGGGATGGACTTGGAAGAAAGACTTCTAGCATGTCTTTGCATGTATAATTATGCCTCTGGAAAGGGTAAGCAAAAACTAATGCATTTCTCAGAAGGAGTGAAACAATCACTGAGACGCCTTTCAAATGTAATTTGGATGGCTGAGGAATTACACCGAGTGGCTGATTTCTTGCTTCCAAACATATCAAGCAGCGTATTTCTTGTGTTCACTCACAAATCCTTGAGGTAG 2376 0.3826 MRRSLGIHVKRFLTRNWEIGFVLRNEKSTHPFTIMLLRDVPNTKCVSSTSVQHEPRFKNCNTDSKSFIDIAEYEGQEKALKQLNSVQCHYKKQQTISDQICLKDLFKESKTAASVDSCYGDFRDKRDLEKVDDRNFHIRTTITKADDLQPETYDRKLHQNPGLPQAPQYPTQEELYERSIIKLDSSRFTWSIEDVTLSISKNIDETRNIIFHAEDELIEEALQPLKFHLFDHATTAGKHRLSQISHQESSKTELETLYSLLNFNEVCSKSRRFSLHALRRISGLQYSKALGKSGEEHTVDIATIYESLIIAISTSKEEKELRASVSILTTIVSRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCNSNGYKSKPESLHLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLNGLLEFARNDNLEQFFSLTTILIKCMQFDAQCRKYVSQFTPLAPFIHLLQTENTRAKCMALEFFHEILCVPRSSAISLLQRILQEGGINIKQILMHCAHQLQPEHQILAANILLQLDTLNSSDKSLFREEAVQILVSAMTSVESSEQTLSASILSNLAGTYAWTGEPYTVAWLLRKAGLTSSYHQNMIRNFNWLDQNLQDTSIDLWCSKIAKCIISVGDSIFHALEKGLRSKVKRVSRDCLVAVAWLGCQISKSPDSLSYSSSEIILSGIQQFLHPGMDLEERLLACLCMYNYASGKGKQKLMHFSEGVKQSLRRLSNVIWMAEELHRVADFLLPNISSSVFLVFTHKSLR* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2234 791 SUPERFAMILY ARM repeat 4 754 IPR016024 -
Lja6g2234 791 PANTHER OS04G0584500 PROTEIN 75 778 - -
Lja6g2234 791 Gene3D - 239 770 IPR011989 -
Lja6g2234 791 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 75 778 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2234 - - gmx:100782870 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2234 6 51295625 51312003 Lja6g2234 6 51295625 51312003 ECH