Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2232 ATGGAGGAAACCATATCCCGCATAGCGGCGGAGTTCGAGGACCTCCGCGACAACCACCACACAACAGACCCACCACCTCTCTCTCAACAATGCCTCTCCGATCTCCAACGCCTCCTCAACTCCTCCCAAACCTACGCCCTCGAGCATCTCCTAGAAGCCGTTTCCCTCTCCTCCCTCATCCCCTTCATCGCCTCCGCCATGGAATCCACCCCCACACACCACTCCCTCCTCGCCTCCGACGTCTTCCTCTCCTCACTTCTCTCCCTCGACGCTCCCGTCTTAACCCTCTTCACCCCTCTCGCCTCCCTCTCCTTCCTCCGCTCCCTCCGCCGCTGCTTCAAAACCACCCCCTCCTCAAGCCACCACCACCATCGCAAGAGAAAGCGTCCTCCCAAGAAAACCCCCAAAATCGCCGCCGGCGGCGGCGACGATGACGACGCCGCCGAACACCTCGATGTTAGGGTTCTGCTCCCACTGCTGGAGAAGCTCGTGCGCGTCATGGGTTTGATCCACCTCGACCTCTTGCCGGAGACCCTCAAGTCACTGGTTCAGACCATCGCCGAGGTCCCTGTGTTGGCGCTTGAATCGTTCGGAAACACTGTGCAATACGACAGGCTGGTTGGTCTCTGCTCGCGGGTGTTGAAGGAGGTTCTGAAACCACAGCACGGTGAGCCTTCTGATACTGCAGCTGAGGTTTTGAAGTCGCTGTGCCCTCTCGTTCTCATGCCCAAGTCGCAAGCTAGGACGTTTGCGCTCGGTTTTGTGACGGGTCTTGTTGGGGATTCTGATGGGGTGAAGAAGGCTCTGGTCAATTTTCCGAGGTATTTGGTGAAGAAGGCACCGGATAAGGCTGAGCCCAGAGCCTTGGCTGTGGATTCCATCACAGAGGTTGTTCGGGTTATGGCATTGGAGGATCAAGCTGAGTTTGTCAAGTTTGTGGTGAAGATGGGTCAAGGGAAACAGAACCTTAGGCTTTTAGCAGTTGATCTTATTTTGAATTTGGTGGCTACTTTGAAGGACCCATTGGGGGTGAATTCAGAGGGAGAAGGGAAAGCGGTGTGGGGGATTTGGTGTTTGGAGGCGTTGGTAAAGCGTTGTTCGGATTTGAGTGCTGTAGTTCGAGCACGGGCTTTGTCGAGCCTGGCGCAGCTGGTGGGGTTGCTCTCACGTGATGCTAATGCTAGTGTGGTTTTGAAGGAGTTTTTGGGGTTTGGTAAGGCTGGTGATGACAATGTTGAAGGTGGTGGAATCAATGGTATGCTGAGGAGAAGGTGTGTGGATGAGAAAGCAGCTGTGAGGAAGGCTGCAATTCTTCTGGCTACTAACTTAACTTCTCTTCTCCGGGGTGCGATTGATGAGGTGGTGCTCAAGGCAATGGGCATGGCTTGTTCGGATCCACTTGTTAGCATGCGGAAAGCAGCGGTTGCGGCTCTTTCAGAGGCTTTCAGAACATTTTCTGCCGAAACAGTAATAACTGAGTGGCTACATTCGGTTCCTCGTCTAATAACTGACAACGAATCTAGCATCCAAGAAGAATGTGAGAACATGTTTCAAGAACTTGTTTTGGATCGGATATCTAGAGCTGCATCTACTACCTCTTCATATAGTGAGTCTATATCTAATGGTTTGGACAAAGAGATGGAGATGCTTTTTCCCCAAGGAATTATGTTTCTTCTAAGAGAGATTTGCAATGGGGAGGTGAGCCCTTGGGTGAAGAAAATTTGCACAAACTTGGGCAAAAAGAAACGGATGAATAAGAGAATTGTTACTGCACTTCAGAATATAATTAAGGAGTCTGAGACAAGGTGGCTGAGCCATTCCATGCCAATAGAAAAGTGGACTGCCCCACCAGGTGCCTGGTTTCTTTTATCAGAGGTGTCAGCATTTCTTCCAAGTTTAGTGGAGTGGAAATTTCTTCTTCATCATTGGAAGCTTCTTGACAAACATGAAGTGGAAGGGGAGTTTAAAAGCCCTTTTTTACAAAAAAGTGCATTTGAAGAGGAAGATAGCACAGAATGCAATTCTGTTGCCTGGGCTAGTGACCGGGTTTTCCTCTTACAAACAATGTCTAATGTTTCTGTGGAGCTGCCTCCTGAGGCTGCAGCAGATTTGGGTGTTAGCTTGCTCAATCGGGTTGAAGAATTCAATATGCATTCAACGGAGGTTGATGCTCATGTAAAAACACTCAAGACATTGTGCAAGCGGAAAGCTAGAAATCTCGAAGAGGCTGAAGGTTTAGTTTTGAAATGTGTAAACCAAGTTCTCTCCACAGCCTTTAAAATAATAGACAAGTTCGTTTCAGAGAATCCAGGGCAGAATACTGAAAGTGACCTCTTCACGCCACCTAGAAGTGGGACCAGTAAAGGCAGGAAATCAGTAAGAATGTGCAAGTCATTGTCAAAAGCAACAACAGCGATTTATACAATTGGGTCTTTAGTTATTGTCTGCCCATCTGCTGATATGAGCAATATAGTTCCATTGTTGCATACTATCATAACATCTGGGAATTCTGGCCCCAAATTGGATAAACTACCTGGCCCTGCAACCTCTCTACAACAAGAAGCTCCTTCTGTTTATATTCAAGGGTGGCTTGCCATGGGCAAACTTTGCCTTGCTGATGGAAAGCTTGCAAAGAATTATATTCCTCTCTTTGTACAGGAGCTTGAAAACACTGAATCTGCAGCTCTTCGCAATAACATTGTGGTCATGATGGCAGATTTTTGTGTTCGGTACACTGCTCTTGTTGATAGTTATATGACAAAGATCACAAGGTGTCTCTTAGATCCTTGTGAACTTGTGCGGAGGCAAACATTCTTATTGCTCTCGAGGTTGTTGCAGAGAGACTACGTGAAATGGAGAGGAGTGCTGTTTCTTCGGTTCCTTTTGTCACTCGTTGATGAATCAGAAAAGATTAGACGGTTAGCAGACTTTCTCTTTGGAAATATTTTGAAAGTCAAGGCTCCTCTTTTAGCATATAATAGTTTTGTTGAGGCTGTTTATGTTTTGAATGACTGCCATGCCCATAATGGACATCGTGAGTCTCAGGGATCAAGAAGGGAAAGCCAAGTTTTCTCCATTAGGGGTACTGATGAAAGGTCAAGGTCTAAAAGAATGCATATATATGTTTCTTTACTAAAACAAATGGCTCCTGAGCATCTTCTAGCAACCTTTGCCAAGCTATGTGCAGAAATTCTTGCTGCTGCTTCTGATGGTATGCTCAATATAGAAGATGCAACTGGTCAGTCTGTTCTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCCTCCCATCCTCTCGTGCCGCATCATCTGAGACAGCAGATGTCGAAGAAGAAGGCGGAGAAAATGCTGCAAGAGGAAAGGCTATTACTCAGGCGGTCAAGAAGGGCCTTATCCAGAACACTATCCCCATCTTCATAGAGTTGAAACGTCTATTGGAAACCAAGAACAGCCCCCTCATTGGCTCTCTGATGGAGTGCCTCCGCGTCCTTCTCAAGGACTACAAGACTGAGATTGATGAAATATTAATTGCTGATAAGCAGCTGCAGAAAGAGCTTATCTATGACATGCAAAAATATGAAGCAACAAAAGCTAAAGCCACAGTTGCTGAGGCTGCTGCTGCCACCAAACCAAAATCAGGTGCAAATCAAACACCCGAGGCTTCTAAGAATCTAACCCAGACACAGGGACAAACAGTTAGATTTAAGGAGACTAACGAGTTTCCAAGTGGTTCGAGAGTTGCTTCAGCAATGGCAGATGCGGCAGCTGCCGCATTAGCTCGTTCTGTGCTAAAGGAAATCAACAATGGGAAAGGGACTCCCCCACTCAGTGCTTTCAGGTCTCCGAAAGTGAAGTCTGTTACTGGTGCTGGTGCATGTGAATCTAGAGATGGAAAGCGCATGGATGTCATCCAATCGTTGAAGAAAAAACACTCATTTGATGATGTTGATGAAGAAAACTAA 3969 0.4699 MEETISRIAAEFEDLRDNHHTTDPPPLSQQCLSDLQRLLNSSQTYALEHLLEAVSLSSLIPFIASAMESTPTHHSLLASDVFLSSLLSLDAPVLTLFTPLASLSFLRSLRRCFKTTPSSSHHHHRKRKRPPKKTPKIAAGGGDDDDAAEHLDVRVLLPLLEKLVRVMGLIHLDLLPETLKSLVQTIAEVPVLALESFGNTVQYDRLVGLCSRVLKEVLKPQHGEPSDTAAEVLKSLCPLVLMPKSQARTFALGFVTGLVGDSDGVKKALVNFPRYLVKKAPDKAEPRALAVDSITEVVRVMALEDQAEFVKFVVKMGQGKQNLRLLAVDLILNLVATLKDPLGVNSEGEGKAVWGIWCLEALVKRCSDLSAVVRARALSSLAQLVGLLSRDANASVVLKEFLGFGKAGDDNVEGGGINGMLRRRCVDEKAAVRKAAILLATNLTSLLRGAIDEVVLKAMGMACSDPLVSMRKAAVAALSEAFRTFSAETVITEWLHSVPRLITDNESSIQEECENMFQELVLDRISRAASTTSSYSESISNGLDKEMEMLFPQGIMFLLREICNGEVSPWVKKICTNLGKKKRMNKRIVTALQNIIKESETRWLSHSMPIEKWTAPPGAWFLLSEVSAFLPSLVEWKFLLHHWKLLDKHEVEGEFKSPFLQKSAFEEEDSTECNSVAWASDRVFLLQTMSNVSVELPPEAAADLGVSLLNRVEEFNMHSTEVDAHVKTLKTLCKRKARNLEEAEGLVLKCVNQVLSTAFKIIDKFVSENPGQNTESDLFTPPRSGTSKGRKSVRMCKSLSKATTAIYTIGSLVIVCPSADMSNIVPLLHTIITSGNSGPKLDKLPGPATSLQQEAPSVYIQGWLAMGKLCLADGKLAKNYIPLFVQELENTESAALRNNIVVMMADFCVRYTALVDSYMTKITRCLLDPCELVRRQTFLLLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADFLFGNILKVKAPLLAYNSFVEAVYVLNDCHAHNGHRESQGSRRESQVFSIRGTDERSRSKRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDTFQILGCKEIRLPSSRAASSETADVEEEGGENAARGKAITQAVKKGLIQNTIPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKTEIDEILIADKQLQKELIYDMQKYEATKAKATVAEAAAATKPKSGANQTPEASKNLTQTQGQTVRFKETNEFPSGSRVASAMADAAAAALARSVLKEINNGKGTPPLSAFRSPKVKSVTGAGACESRDGKRMDVIQSLKKKHSFDDVDEEN* 1323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2232 1322 Coils Coil 1167 1187 - -
Lja6g2232 1322 MobiDBLite consensus disorder prediction 115 143 - -
Lja6g2232 1322 Gene3D - 358 530 IPR011989 -
Lja6g2232 1322 MobiDBLite consensus disorder prediction 771 792 - -
Lja6g2232 1322 MobiDBLite consensus disorder prediction 1272 1300 - -
Lja6g2232 1322 MobiDBLite consensus disorder prediction 1010 1030 - -
Lja6g2232 1322 PANTHER CONDENSIN 2 1309 IPR026971 GO:0007076
Lja6g2232 1322 MobiDBLite consensus disorder prediction 1213 1242 - -
Lja6g2232 1322 Pfam non-SMC mitotic condensation complex subunit 1 896 1087 IPR032682 -
Lja6g2232 1322 SUPERFAMILY ARM repeat 286 1168 IPR016024 -
Lja6g2232 1322 MobiDBLite consensus disorder prediction 1211 1242 - -
Lja6g2232 1322 MobiDBLite consensus disorder prediction 116 134 - -
Lja6g2232 1322 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 2 1309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2232 Lja-Chr6 51279932 51286263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2232 K11491 - gmx:100793666 1873.21