Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2227 ATGGCACTCAGACCCATTGGTAACGCTCTTCCAACTACCCCAGATAGACCCAAAAAACACCCCAAAATCGCTGTTGCTGCTGCAACCCTAAAGCAACAACAAACCCCTGCTGTCAATGACGAAAACCTAGTTCCGCCGCCGCCATCTGGGGATGCCACCATTGACTATGTTTCCTCTGAGAATCTTATACCCATTTCCGACCCTGAAGCTAAGATTCAAAGTTTGATTGAAGATTTGGATTCGAAAAATTGGATCAAGGTCTGTGAGGCACTGAATGATGTTAGGCGATTTGCATTGTATCACTCTGCGGTTCTATTCCCCATCTTGGGAAAAATTATGTTGGTGGTGACCAAGACAATGAAGAATCCTCGCAGTGCTTTGTGCAAAACCTCTATTATGGCTGCTTCTGATGTTTTCAATGCCTTTGGTGATAAATTGCTTGATCCATCTACCTCTGATGCATTTGATGGCTTGGTGCTGCAGCTGCTGTTGAAAGCATCTCAGGATAAAAGGTTTGTTTGTGAAGAAGCTGAGAGGGCACTTGTGTCAATGGTGGCTTCCATGACCCCTCTTCCCTTGCTTAAGAAACTAAAGGGATGTGTGAGTCACACTAACCTCAGGATCAGGGCTAAGGCTGCTGTTTCTCTCTCCAATTGTGTTTCCAAGATGGGTGTTGAAGAAATGGAGGAGTTTGGGATGGGTGAGATGATTGAAGTGGCTGCGGATTTAGTGAATGATAGGCTTCCAGAGGCAAGAGATGCTGCAAGAAGTGTTGCAACTACAGTGTATGAGGCACTCACAAAGGATGCTGAAGTGGAACAGAAGATGGAGGTGTGGCAGAGCTTCTGCCAATCCAAGCTACAGCCAATTCATGCTCTTTCAATTTTGAAGATTGTTAAAGCTTAG 906 0.4525 MALRPIGNALPTTPDRPKKHPKIAVAAATLKQQQTPAVNDENLVPPPPSGDATIDYVSSENLIPISDPEAKIQSLIEDLDSKNWIKVCEALNDVRRFALYHSAVLFPILGKIMLVVTKTMKNPRSALCKTSIMAASDVFNAFGDKLLDPSTSDAFDGLVLQLLLKASQDKRFVCEEAERALVSMVASMTPLPLLKKLKGCVSHTNLRIRAKAAVSLSNCVSKMGVEEMEEFGMGEMIEVAADLVNDRLPEARDAARSVATTVYEALTKDAEVEQKMEVWQSFCQSKLQPIHALSILKIVKA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2227 301 MobiDBLite consensus disorder prediction 1 20 - -
Lja6g2227 301 Pfam CLASP N terminal 104 271 IPR024395 -
Lja6g2227 301 PANTHER CLASP 4 299 - -
Lja6g2227 301 SUPERFAMILY ARM repeat 67 269 IPR016024 -
Lja6g2227 301 SMART TOG_3 61 293 IPR034085 -
Lja6g2227 301 Gene3D - 52 288 IPR011989 -
Lja6g2227 301 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2227 Lja-Chr6 51196064 51197833 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2227 - - lja:Lj6g3v1445630.1 582.408