Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2223 ATGGCTTCCCAAGGCCTGCATGAAGCAAAGAAGAAAACTAAAGCCAAACGAGCACTACGTTCCCTAGCAATAGGAATCTTGGTCCCACTCACCCTCACATTAACCATAATCATCCTCTTCGGCTCAGGCCGCAAGTACAACCGGCTAACCAAGCCGGTCTGGTTCGCGCCATTATGGTTCATCCACTTAGCCACATTGGGCTCATCGTTCTTCATGGGGCTCGCGGCTTGGCTCGTGTGGGCTGATGGCGGGTTCCAAGGGGAGGAATCAGATGCATTGTCTCTGTATGTGGCGCATGTGTGTTTGAGCATTGTGTGGCACCCGCTTGTGCTTGTTATGGGTGCGTTTTGGGTTGCGGCGGTTTCTTGCGTTGTGAATTTTGGGACTCTGTATCTGTGTTACTTGAGGTTTAGAAGGGTGAACCCTTTTGCTAAAGATCTGGCTAAACCGTGTCTGTTGTGGGCTGCGTATCTTACTGCTGTTAGCTTCAAGCTCTTGTTTCTTTGA 507 0.503 MASQGLHEAKKKTKAKRALRSLAIGILVPLTLTLTIIILFGSGRKYNRLTKPVWFAPLWFIHLATLGSSFFMGLAAWLVWADGGFQGEESDALSLYVAHVCLSIVWHPLVLVMGAFWVAAVSCVVNFGTLYLCYLRFRRVNPFAKDLAKPCLLWAAYLTAVSFKLLFL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2223 168 CDD TSPO_MBR 40 166 IPR004307 GO:0016021
Lja6g2223 168 Pfam TspO/MBR family 39 166 IPR004307 GO:0016021
Lja6g2223 168 PANTHER TSPO/MBR FAMILY PROTEIN 8 167 - -
Lja6g2223 168 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 8 167 IPR004307 GO:0016021
Lja6g2223 168 PIRSF PBR 11 168 IPR004307 GO:0016021
Lja6g2223 168 Gene3D TspO/MBR protein 16 168 IPR038330 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2223 K05770 - gmx:100790873 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2223 6 51165227 51165733 Lja6g2223 6 51165227 51165733 ECH