Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2205 ATGGCTCCTGTACCTATTTCTACCCTCAATGTTGGACACATTGATGATGTCCAAGAACTGAGAAAAACTAAGCCAAAGACAATTCCTCAAAGATTTGTAAGAGACATGACAGAAAGACCAACACTTGATGACACTGCTCTTTCCTCACCACAGAGTGACCTGCCTGTCATTGATTTCTCTAAGCTTAGCAAAGGGAACAAAGAGGAAGTCCTCAGTGAACTTTGCAAGCTTGCAATTGCTTGTGAAGAGTGGGGATTTTTTCAGGTAATCAATCATGAGATTGACCTCAATCTGTTGGAGAGCATAGAGAATATGAGCAGGGAGTTTTTCATGCAACCTTTGGAAGAAAAACAGAAATATCCAATGGCTCCAGGGACAGTCCAAGGGTATGGACAGGCTTTTGTTTTCTCAGAGGACCAGAAGCTGGACTGGTGCAACATGTTTGCTCTTGGAATTGAACCTCACTATGTTAGGAACCCAAATCTATGGCCAAAGAAGCCAGCAAGATTAAGTGAAACAATTGAAGAGTACTCTGAAGGAATCAGGAAACTTTGCCAGTATCTGCTAGAATACATAGCTTTAGGCCTGGGATTGAAAGGGGACGCATTTGAGAAAGTGTTTGGTGCAGCAGTGCAAGCCATAAGGATGAACTACTACCCACCATGTTCCAGGCCTGACCTTGTCTTGGGCCTGAGCCCCCATTCAGATGGAAGTGCCCTCACTGTGCTGCAGCAAGCAAAGGGAAGCCCAGTTGGGCTTCAAATACTAAAGAACAGCACATGGGTTCCTGTTCAGCCAATTCCAAATGCTCTTGTCATCAACATTGGAGACACATTAGAAGTTCTTACCAATGGAAAATACAGGAGTGTGGAGCACAGAGCTGTGGCTCATGAGGAGCAAGATAGGCTTTCAATTGTGACATTTTATGCTCCTAGCTATGAAGTGGAGCTTGGACCAATGCAAGAATTTTTTGATGAAAACCACCCATGCAAGTATAGAAGATACAACCATGGAGAGTACAGTAAACATTATGTGACAAACAAGTTACAAGGAAAAAAGACCCTGGACTTTGCCAAGATCCAAGTAGAAAATACAAACTAG 1101 0.4323 MAPVPISTLNVGHIDDVQELRKTKPKTIPQRFVRDMTERPTLDDTALSSPQSDLPVIDFSKLSKGNKEEVLSELCKLAIACEEWGFFQVINHEIDLNLLESIENMSREFFMQPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPHYVRNPNLWPKKPARLSETIEEYSEGIRKLCQYLLEYIALGLGLKGDAFEKVFGAAVQAIRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQAKGSPVGLQILKNSTWVPVQPIPNALVINIGDTLEVLTNGKYRSVEHRAVAHEEQDRLSIVTFYAPSYEVELGPMQEFFDENHPCKYRRYNHGEYSKHYVTNKLQGKKTLDFAKIQVENTN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2205 366 PANTHER PROTEIN SRG1 10 363 - -
Lja6g2205 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 165 IPR026992 -
Lja6g2205 366 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 363 - -
Lja6g2205 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 311 IPR005123 -
Lja6g2205 366 Gene3D - 12 352 IPR027443 -
Lja6g2205 366 SUPERFAMILY Clavaminate synthase-like 15 352 - -
Lja6g2205 366 Pfam 2OG-Fe(II) oxygenase superfamily 212 311 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2205 Lja-Chr6 51028523 51031147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2205 17 360 Glycosyltransferase AT5G59530 35.393 2.05e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2205 - - gmx:100785152 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2205 6 51028523 51031147 Lja6g2205 6 51028523 51031147 ECH