Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2196 ATGATGAAGAATAACCATGGTGACATTGAATCCTTTGATCAAGAAGGTGGAGAGGAAGCACATCTTGATCCACCATCAATGCACCTCCATGAAAAAGATGAAAAGTCCATCAAGAACAAGAGGTACATGCTCCTTTTAGTGATCAATTACATTTCTCTCTTTGTGGGCTCTGTTTCTTCAAGTTTGCTCTCCAAATACTACTTCATCCACAAAGGTTCTAGCAGATGGGTCTCAACTTGGGTCCAATCTGCAGGCTTTCCTCTCTTAATCATCCCAATTTATCTCCCTTATCTCCTGAAATTCAACCAGAGAAAACCCTTCTCTGATTTCAACAAAAAGATGCTAACATTATCAATCTCAATTGGTGTCATGTTAGGATTCAACAACCTTCTATTCTCTTGGGGAAACTCATATCTCCCTGTTTCAACCTCTGCCCTTTTGCTATCCACCCAACTAGTTTTCACTCTTATTCTCTCTGCCATCATGGTGAATCAAAAAATCACATTCTTAAACCTTAACTGTGTGATTCTTCTCACCTTAGGCTCTGTCCTTCTAGCATTAGATTCCAGTCATAATGTGAAACCAAATGAGGTAACAAAAAAGGAGTATTTTGTTGGGTTCATTTGCACAATTGGTGCAGGGTTGTTGTTTGCTCTGTATTTACCAGTGATGGAGAAGATTTACAAGGAGGTGCATTGTTATGAGATGGTGATGGAAATGCAGCTTGTGATGGAGATTACAGCAACAGCATTGGCCACATTGGGAATGGCATTTAATGGTGGATTTTCTCAGATGAAAGAAGAGGGACATAGAGTGTTTGATAAGGGGAACTCTGTTTACTGGGTGAGTGTGGTGGCTAATGTGGTTACATGGCAGTTTTGCTTCATGGGGGCTGCAGGGATGGTGTTCCTGACATCTGCGTTGACCGGAGGGATATGCACGACGGCGTTGATATCGATGAATGTGTTCGGAGGGGTGGTGGTGTTCAGAGAAGGGTTTAGTGGTGTGAAGGGTGTGTCCACTGTTCTGTGCTTGTGGGGGTTCTGCTCTTATGTTTATGGCATGTATGTTAAGATGGTGCTGCAACAGAGAGATCAAGTGAGGAAGAACATGAATGGGTTGTCATCCACTGAAATGATCCATATCGTTAATCATCCAGTTACTACTGAAATGTATTAG 1179 0.4198 MMKNNHGDIESFDQEGGEEAHLDPPSMHLHEKDEKSIKNKRYMLLLVINYISLFVGSVSSSLLSKYYFIHKGSSRWVSTWVQSAGFPLLIIPIYLPYLLKFNQRKPFSDFNKKMLTLSISIGVMLGFNNLLFSWGNSYLPVSTSALLLSTQLVFTLILSAIMVNQKITFLNLNCVILLTLGSVLLALDSSHNVKPNEVTKKEYFVGFICTIGAGLLFALYLPVMEKIYKEVHCYEMVMEMQLVMEITATALATLGMAFNGGFSQMKEEGHRVFDKGNSVYWVSVVANVVTWQFCFMGAAGMVFLTSALTGGICTTALISMNVFGGVVVFREGFSGVKGVSTVLCLWGFCSYVYGMYVKMVLQQRDQVRKNMNGLSSTEMIHIVNHPVTTEMY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2196 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 94 191 - -
Lja6g2196 392 PANTHER OS09G0467300 PROTEIN-RELATED 19 366 IPR030182 GO:0015211|GO:0016021
Lja6g2196 392 Pfam Purine nucleobase transmembrane transport 45 358 - -
Lja6g2196 392 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 19 366 - -
Lja6g2196 392 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2196 Lja-Chr6 50960310 50961582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2196 31 354 Organic Solute Cotransporters AT1G30840 63.720 7.21e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2196 - - lang:109345016 513.072