Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2195 ATGGCACAAGCCCCACCAAATCCAATTCATCATCAATCTCTCAGCAGCATGGCCCCTCCCAAGACCAACGAAAACGACATTGAAATTGAATCCACTGATCATGAAAGCAGAGCATTTCAATCACTTCCAAATCCCCCATTATCCATGGCCAACAACAAAAAGCACCTGAAAGAAGAAGATCAAAAGTCCTTCACTAACAAGAGGTACATACCCCTTTTGATCATCAATTACCTAATGCTCTTTGTTGGTTCCCTCTCTGGTAGTTTGCTATCCAAGTACTATTTCATCCACAAAGGTTCAAGCAAATGGGTCTCAACTTGGGTCCAATGTGCAGGCTTTCCCCTTCTAATCATCCCAATTTTTCTCCTTTATCCTCTCAATTTAACCAAGAGAAAACCCTTCACTGATTTCACCCCAAGGTTGTTAACTCTATCAATTTTTGTTGGTTTCATGTTAGGGGTTAACAATCTTTTAATCTCATGGGGGGTTGCATATCTCCCTGTCTCAACCTCAAGCCTTCTGTTATCATCTCAGCTTGTTTTCAACCTCATCCTCTCTGCCATCATTGTGAAACACAAAATCACATTTTCTAATCTCAACACTGTGATCCTTCTCACTTTAAGCTCCATCATCCTTGCATTGAATTCCAGCAATGAAAAACCAGAGGGGGTCACTAGAAAAAATTACTTTGTTGGATTCTTCTGCACCATTGGTGCAGGGTTGCTGTTTTCTCTGTATTTGCCAGTGGCGGAGAAGATTTACAAGAAGGTTTACTGCTATGAAATGGTGATTGAAATGCAGCTTGTGATGGAGATTGCAGCAACAGCATTGGCTACATTGGGAATGGCAATTGATGGTGGATTTTCTCAGATGAAGGAAGAGGGACAGAGATTGTTTGATAAAGGGCCCAGAGTTTACATTGTGACTGTGATGGCTAATGTGGTGGCATGGCAACTCTGTTTCATGGGAACTGCAGGGATGGTGTTTATGACATCTTCGTTAACCGGAGGGATTTGTGCAACGGCATTGTTGTCCATGAATGTGTTGGGAGGGGTTGTTGTTTACAGAGATGCTTTTGGGGGTCTTAAGGCTGTGTCAACTGTTCTGTGCATTTGGGGATTCTGTTCTTATGTTTTTGGATTGTATGTTAAGATGGTGAAGGAGAAAGCTAGAATGATGAGGAACAATAGTACTGGTTCATCCATGGAGTTGATCACTATTGAGAATCATGGTGGGAGTACTCATTGA 1248 0.4199 MAQAPPNPIHHQSLSSMAPPKTNENDIEIESTDHESRAFQSLPNPPLSMANNKKHLKEEDQKSFTNKRYIPLLIINYLMLFVGSLSGSLLSKYYFIHKGSSKWVSTWVQCAGFPLLIIPIFLLYPLNLTKRKPFTDFTPRLLTLSIFVGFMLGVNNLLISWGVAYLPVSTSSLLLSSQLVFNLILSAIIVKHKITFSNLNTVILLTLSSIILALNSSNEKPEGVTRKNYFVGFFCTIGAGLLFSLYLPVAEKIYKKVYCYEMVIEMQLVMEIAATALATLGMAIDGGFSQMKEEGQRLFDKGPRVYIVTVMANVVAWQLCFMGTAGMVFMTSSLTGGICATALLSMNVLGGVVVYRDAFGGLKAVSTVLCIWGFCSYVFGLYVKMVKEKARMMRNNSTGSSMELITIENHGGSTH* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2195 415 MobiDBLite consensus disorder prediction 1 46 - -
Lja6g2195 415 MobiDBLite consensus disorder prediction 1 22 - -
Lja6g2195 415 Pfam Purine nucleobase transmembrane transport 72 385 - -
Lja6g2195 415 PANTHER OS09G0467300 PROTEIN-RELATED 41 396 IPR030182 GO:0015211|GO:0016021
Lja6g2195 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 116 217 - -
Lja6g2195 415 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 41 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2195 Lja-Chr6 50956062 50957671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2195 52 380 Organic Solute Cotransporters AT1G30840 61.934 2.41e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2195 - - gmx:100795076 477.633