Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2174 ATGGCTTTCAATAATGACCCTGAGCCACAAAAAAGCTACTGGAGATGGAGCAAGCAAGATTTCTTACCAGAGGAATCCTTTCAGAGCTGGAACAACTACCTTCATGCTCTTTCACAAACATGGTTAAGGTTCAAGGATCGTCTCCAGAGCAGATCAGATGATGCAACTGAAACAGAAGAGCTCAGAAAACAAAGTGAGCATGACATGAAAAGATGCCTCAACTGGTGGGACCTTATCTGGCTCGGGTTCGGTGCGGTGATTGGAGCAGGAATCTTTGTGCTAACTGGTCAAGAAGCTCATAACCATGCTGGACCAGCCATTGTCTTATCCTATGTTGCTTCTGGCATCTCAGCAATGCTTTCTGTCTTCTGCTACACAGAGTTTGCAGTGGAAGTTCCAGCTGCAGGAGGGTCATTTGCTTATCTGAGAATTGAGTTAGGAGATTTTGCTGCTTTCATAGCAGCTGGGAACATTCTTCTTGAAGGCGTTCTTGGAGGTGCAGCAGTGGCAAGATCATGGACATCTTACTTCACAACCCTTTTGAATCTTCCCAAGAATTCACTTAGGATCAAGACAAACCTCAAAGATGGATACAACATGCTGGACCCTATAGCTTCTGTTGTTTTGTTAATTGCTGCAACAATTGCAGTGATCAGCACAAGAAAAACCTCACTTCTCAATTGGATAGCATCTGCAATCAACACAGTGGTGATCATATTTGTGATCATTGCAGGGTTTGCTCATGCCAATACCTCAAATTTGACACCTTTTTTACCTTATGAGGCTAAAGGGGTGTTCCAAGCTGCTGCAATTCTTTACTTTGCATATGGAGGGTTTGACAGCATTGCAACCATGGCTGAGGAAACAAAAAATCCATCAAGGGACATACCTATTGGCCTTATTGGGTCAATGTCGATTATCACAGTGTTGTATTGCTTAATGGCACTCTCACTGAGCATGATGCAGAGGTACACAGAGATAGACACAGAAGCAGCTTTCTCAGTTGCATTTCAGCAAGTAGGAATGAAGTGGGCAAAATATGTTGTTGCTTTTGGTGCACTGAAGGGTATGACAACAGTGCTTCTGGTAGGAAGATTAGGACAAGCGCGTTACATAACTCACATTGCACGTTCTCACATGATCCCTCCATGGTTTGCTCTTGTTCACCCCAAGACAGGAACACCAATAAATGCTACACTCCTGATCACAGTTTTAAGTTCCTGCATAGCTTTCTTCACAGGCTTGGATGTGTTATCTAGCTTGTTATCAGTGAGCACACTCTTTATCTTCATGATGATATCTGTTGCTCTTCTGGTGAGGAGGTATTATGTGACAGGAGTCACACCAAGAGAGGACATGTTAAAGCTAGTTTTCTTCTTGATGATGATTGTTGCTTCCTCAATGGGGATTTCAGCTTATTGGGGTTTGAGGCCTAATGGTTGGGTTGGATATGCAATTGCTGTTCCTGTTTGGTTCTTGGCAACTCTTGGGATGTCAGTGTTTTTGAAACAGCAAAGGCTGGCAAGAGTTTGGGGGGTTCCACTGGTGCCATGGCTCCCATCTTTGTCTATTGCAACAAATGTGTTTCTCATGGGATCTTTGAGTTATGATGCCTTTGTAAGATTTGGAGTGTGCACTTTGGTGATGTTGGTGTACTATGTTTTGTTTGGGCTACATTCAACTTATGATATGGCTCATCAACAAGAAAAGGTGCAAATGCAATCCATCAAAGTTAAGCACACAGAGACCATTGAGAATGCAAACCCTTAG 1770 0.4316 MAFNNDPEPQKSYWRWSKQDFLPEESFQSWNNYLHALSQTWLRFKDRLQSRSDDATETEELRKQSEHDMKRCLNWWDLIWLGFGAVIGAGIFVLTGQEAHNHAGPAIVLSYVASGISAMLSVFCYTEFAVEVPAAGGSFAYLRIELGDFAAFIAAGNILLEGVLGGAAVARSWTSYFTTLLNLPKNSLRIKTNLKDGYNMLDPIASVVLLIAATIAVISTRKTSLLNWIASAINTVVIIFVIIAGFAHANTSNLTPFLPYEAKGVFQAAAILYFAYGGFDSIATMAEETKNPSRDIPIGLIGSMSIITVLYCLMALSLSMMQRYTEIDTEAAFSVAFQQVGMKWAKYVVAFGALKGMTTVLLVGRLGQARYITHIARSHMIPPWFALVHPKTGTPINATLLITVLSSCIAFFTGLDVLSSLLSVSTLFIFMMISVALLVRRYYVTGVTPREDMLKLVFFLMMIVASSMGISAYWGLRPNGWVGYAIAVPVWFLATLGMSVFLKQQRLARVWGVPLVPWLPSLSIATNVFLMGSLSYDAFVRFGVCTLVMLVYYVLFGLHSTYDMAHQQEKVQMQSIKVKHTETIENANP* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2174 589 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 10 574 - -
Lja6g2174 589 Pfam C-terminus of AA_permease 511 560 IPR029485 -
Lja6g2174 589 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 10 574 - -
Lja6g2174 589 Gene3D Amino acid/polyamine transporter I 67 495 - -
Lja6g2174 589 Pfam Amino acid permease 73 444 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2174 Lja-Chr6 50765563 50767751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2174 10 568 Organic Solute Cotransporters AT2G34960 75.536 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2174 - - gmx:100797541 993.416