Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2173 ATGTCAATATTGGCTAGACTGCGCTGTGTCACTGTAGATGTTACCGGCACCCTAATGGCTTACAAAGGGGAGCTTGGTGACTATTATTGCATGGCCGCTAAAGCTGCTGGCCATCCGTGCCCAGACTACAAACGTGTACATGAGGGATTTAAGCTTGCATATAAGGACATGGCAAAGAAGTATCCCTGTTTCGGGTTTGGAGCCAAAATGCCGAACATTGTGTGGTGGAAAACCTGCGTGCGTGATTCTTTTGTCAGGGCTGGATATGAATATGATGAGGAAACATTTGAGAAAATTTTCAGACGCATATATGCATCTTTTGGGTCATCTGCTCCTTATACTGTCTTTCCGGACTCCCGACCATTTCTTAGATGGCTTCGTGGAAAGGGTGTCAAAGTTGGCCTCGTGAGCAATGCAGAGTATCGATATCCAGATGTGATTCTTCCAGCTATGGGTATAAATGAGGGATCTGAGTGGGACTTTGGCGTGTTTTCTGGTCTTGAAGGCGTTGAGAAGCCAAACCCAAAAATTTATGAGATTGCACTTGAGAGGGCTGGAAATATTAAACCTGAAGAAACTTTGCATATTGGCGATAGCATGCGGAAAGACTATGAGCCAGCTAAGAGCATAGGGATGCATGCACTATTGTTGGACAGATTCAAGACACCAGATGCTGATGAGTGGAGGAAATCTGGGGCAGTTGTTCTTCCCGATTTGGAGGCAACACAAGAATGGCTTTCTTCAGAAAAGTCATCTTGGTAG 762 0.4528 MSILARLRCVTVDVTGTLMAYKGELGDYYCMAAKAAGHPCPDYKRVHEGFKLAYKDMAKKYPCFGFGAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSRPFLRWLRGKGVKVGLVSNAEYRYPDVILPAMGINEGSEWDFGVFSGLEGVEKPNPKIYEIALERAGNIKPEETLHIGDSMRKDYEPAKSIGMHALLLDRFKTPDADEWRKSGAVVLPDLEATQEWLSSEKSSW* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2173 253 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 8 216 IPR011949 -
Lja6g2173 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 159 175 IPR006439 -
Lja6g2173 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 126 139 IPR006439 -
Lja6g2173 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 7 18 IPR006439 -
Lja6g2173 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 206 219 IPR006439 -
Lja6g2173 253 Pfam haloacid dehalogenase-like hydrolase 8 210 - -
Lja6g2173 253 PANTHER OS02G0173600 PROTEIN 1 251 - -
Lja6g2173 253 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 211 IPR006439 -
Lja6g2173 253 CDD HAD_dREG-2_like 119 223 - -
Lja6g2173 253 Gene3D - 10 221 IPR023214 -
Lja6g2173 253 Gene3D - 23 108 IPR044924 -
Lja6g2173 253 SUPERFAMILY HAD-like 8 243 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2173 - - cam:101507960 486.493