Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2167 ATGGAAGATCAAGTGCAGTGTGAAGTTGGCAAAAAGGAAAACCCTGTTCGAGTATATGCTGATGGAATCTATGATCTCTTTCACTTCGGCCATGCCCGTTGTCTCGAACAAGCCAAGAAATCGTTTCCAAACACTTATCTCCTTGTTGGATGCTGCAATGATGAGACAACCCACAAGTATAAGGGCAAAACTGTTATGACCGAGAAGGAACGATATGAGTCTCTTCGCCACTGCAAGTGGGTTGATGAAGTTATTCCAGATGCGCCATGGGTAATCACTATGGAGTTCCTTGACAAGCATCAGATTGACTATGTCGCACATGATTCTCTTCCCTATGCTGATACAAGTGGAGCTGGAAATGATGTCTATGAATTTGTTAAGTCTGTTGGAAAATTTAAGGAAACCAAGCGGACTGAAGGAATTTCTACTTCTGATATCATAATGAGAATTATCAAAGATTATAACCAGTATGTAATGCGTAATTTGGACCGTGGTTATTCAAGAAAGGATCTAGGTGTCAGCTATGTCAAGGAGAAGAGATTGAGAATGAACATGGGACTTAAAAAATTGCGTGAGAGAGTAAAGAAACAACAAGAGGTGGTGGGAAAGAAGATAGAAACGGTAGGAAAAATTGCTGGAATGAACCGTACTGAATGGGTAGAAAATGCGGACCGCTTGGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATTAGAGACAGAATTCAAGAACGACTGAAGACACAGCAGCTTAAATCTCTACTTTATGATGAGTGGGATGATGATGATGACGTATACGATGATGAATCTGTAGAATACTACAGCGACTAA 852 0.4085 MEDQVQCEVGKKENPVRVYADGIYDLFHFGHARCLEQAKKSFPNTYLLVGCCNDETTHKYKGKTVMTEKERYESLRHCKWVDEVIPDAPWVITMEFLDKHQIDYVAHDSLPYADTSGAGNDVYEFVKSVGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRMNMGLKKLRERVKKQQEVVGKKIETVGKIAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLKTQQLKSLLYDEWDDDDDVYDDESVEYYSD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2167 283 CDD CCT 14 165 IPR041723 -
Lja6g2167 283 PANTHER CYTIDYLYLTRANSFERASE 6 280 IPR045049 GO:0004105|GO:0006657
Lja6g2167 283 SUPERFAMILY Nucleotidylyl transferase 17 149 - -
Lja6g2167 283 Gene3D HUPs 2 236 IPR014729 -
Lja6g2167 283 Pfam Cytidylyltransferase-like 19 148 IPR004821 GO:0003824|GO:0009058
Lja6g2167 283 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 17 84 IPR004821 GO:0003824|GO:0009058
Lja6g2167 283 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 6 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2167 Lja-Chr6 50717617 50722684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2167 42 283 Acyl Lipid Metabolism Gene Families AT2G32260 78.189 1.34e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2167 K00968 - gmx:100786249 483.026