Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2166 ATGGCAACAGGTACCCAAGCCTACGGTGAATCATGGTACTGGGACAACCGCTACACCAACGAACCTGGTCCCTTTGATTGGTACCAAAAGTACATCACTTTGGCTCCAATCATCAACCTCTATGTCCCTCAAAACCACTCCATCCTCGTTGTCGGTTCTGGCAACTCAGCTTTCAGTGAAGGGTTGGTTGATGAGGGTGGTTACTCAGATGTTGTCAATGTTGATATATCTTCTGTTGTCATTGAAGCTATGCAGAATAAATACAAAGATCGTCCTCAATTGAAGTATGTGAAAATGGATGTCAGAGACATGAGTGCTTTTGAATCAGGATCTTTTGGTTCTGTTATTGACAAAGGGACTCTTGACTCTATCTTGTGTGGAAGTAATTCAAGACAAAATGCTACTGAGATGCTTGAGGAAGTTTGGAGGGTCCTTAAGGATAAAGGAGTCTATATTCTGGTGACATATGGAGCTCCGCTATATCGCCTGCGCTTGCTAAAGGAATCATGCTCTTGGTCAATAAAACTCCATGTGATAGAAAAACTTGCATCAGAAGAGAAATCTGATCATCCACTTTGGGAGCTGACAAAACCTGTTCCGCTGAATGACGATGGTAGCTCTGTGGAGGAAGCCCTTGGCCGGAATGCTGATGTCCATTACATATATATATGCACTAAGGAAAGTTCTGCTAACGAACATTAA 702 0.4288 MATGTQAYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPQNHSILVVGSGNSAFSEGLVDEGGYSDVVNVDISSVVIEAMQNKYKDRPQLKYVKMDVRDMSAFESGSFGSVIDKGTLDSILCGSNSRQNATEMLEEVWRVLKDKGVYILVTYGAPLYRLRLLKESCSWSIKLHVIEKLASEEKSDHPLWELTKPVPLNDDGSSVEEALGRNADVHYIYICTKESSANEH* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2166 233 Gene3D Vaccinia Virus protein VP39 6 232 IPR029063 -
Lja6g2166 233 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 2 226 - -
Lja6g2166 233 CDD AdoMet_MTases 48 156 - -
Lja6g2166 233 Pfam Methyltransferase domain 49 152 IPR013216 GO:0008168
Lja6g2166 233 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 2 226 - -
Lja6g2166 233 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 168 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2166 Lja-Chr6 50711905 50715858 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2166 - - gmx:100792939 400.208