Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2128 ATGTTGGGTGGTGCAATCTCAGCTCCAACAACTCAAAGCCTCAATGGAACAAGAAGAATTGCAATGCTTTATCCATCTCATAAGAACCTAGCATCAAGTACCAGAGGATTTTCATCAAAAGAGAGTTGTTTTCTCAGAGGTCACCACATCAACATAAAGCAAATTTTTGGGCTTATCTCTAGTCATGCTCCACGAAGCAAAGCAGGATTTGTTGTTTCTCCAACCTGTGTCCTGCCTCTGACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGTTTGATGGCTGATGGAGGGAATGTCGCATTGCATGAGATAGATGGGCTTGTTGTTGTCCTCAAGCTACAAGGAGCATGTGGGTCATGTCCTAGCTCAGCTATGACACTAAAGATGGGAATCGAACTTCGCCTCCGGGATAAGATTCCAGAAATCATGGAAGTGGAGCAGGTACTAGACACCGAGACCGGTCTTGAGCTAACCGAAGAAAATGTTGAAAATGTTCTTTCTGAAATTAGACCTTACCTTGCTGGCACTGGGGGAGGAATATTAGAGCTTGTTCAGATCAATGATTATGTTGTCAAAGTTCGGTTAGGTGGACCAGCAGCTGGGGTTACGACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGACAAGATACCTTCTATTGCGGCTGTGCAGCTAATAGACTGA 696 0.4483 MLGGAISAPTTQSLNGTRRIAMLYPSHKNLASSTRGFSSKESCFLRGHHINIKQIFGLISSHAPRSKAGFVVSPTCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIELRLRDKIPEIMEVEQVLDTETGLELTEENVENVLSEIRPYLAGTGGGILELVQINDYVVKVRLGGPAAGVTTVRVALTQKLRDKIPSIAAVQLID* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2128 231 Gene3D - 77 159 IPR034904 -
Lja6g2128 231 Gene3D - 160 231 IPR034904 -
Lja6g2128 231 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 23 231 - -
Lja6g2128 231 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 82 156 IPR034904 -
Lja6g2128 231 Pfam NifU-like domain 166 228 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lja6g2128 231 Pfam NifU-like domain 85 150 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lja6g2128 231 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 23 231 - -
Lja6g2128 231 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 160 230 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2128 Lja-Chr6 50195479 50197222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2128 - - gmx:100806364 373.629