Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2114 ATGAAAACAGCAAAGTTTTGGTGCCTAAGCATGGGTGATATGCAGATCTTGCCTGGATCTCGCTACCGTCCTTCCGTGAAGAAGCCAATTTGGATTATTGTCCTGGTTTTGTTTGTGTGCGTGTTTCTCATATGTGCTTATATCTACCCCCTAAGAAGCAGTACAGCTTGTTATGTTTTTCCTTCTAGAGGGTGCAAGGTTATTGCTGATCAGCTTCCACCTCTTCCTGCAAGGGAGTACACCGATGATGAGATTGCATCACATGCTGTTATTAGGGATATTTTAAACACACCACCAGTTTCACAAAATCCAAAAATTGCCTTCATGTTTTTGACGCCTGGTTCTCTACCATTTGAAAAATTGTGGGATAAATTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCACGCATCTAAGACTAAACCAGTTCATGTGAGCCGTTATTTTGTTAATCGGGATATACGCAGCAGCCAGGTGGTATGGGGTAAAATTTCCATGATTGATGCAGAGAGACGACTATTGGCAAATGCCCTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAGCTGTGTGCCACTCTTTAATTTTGACTATATTTTTCATTATCTGGTACACACAAATATCAGCTTCGTGGACAGTTTTCGGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACATATGTTACCTGAAGTGGAGATTAAGGACTTCAGAAAGGGTGCTCAGTGGTTTTCTATGAAGCGGCAGCATGCTGATATAGTTGTGGCTGACCATCTTTATTACTCAAAATTTCAGGATTTCTGTCAGCCTGGTTTTGAAGGGAAAAATTGCATTGCGGATGAGCATTACTTACCCACCTTCTTCAAGATTGTCGATCCTGGTGGAATTGCGAACTGGTCAGTAACTCACGTTGACTGGTCTGAGAGGAAATGGCATCCAAAATCCTATAAGGCTCAAGATGTTACATATGGGCTTTTAAAGAATATCACGTCCATTGATGTAAGTGTGCACGTCACCAGTGAGAAGAAGAATGAAGTGCAAAGATGGCCTTGTTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCTAGGAAATTCACTCCTGGAACACTGGACAATTTGTTGCAGCTTTTTTCAAATTACTCATCATTTTGA 1176 0.4124 MKTAKFWCLSMGDMQILPGSRYRPSVKKPIWIIVLVLFVCVFLICAYIYPLRSSTACYVFPSRGCKVIADQLPPLPAREYTDDEIASHAVIRDILNTPPVSQNPKIAFMFLTPGSLPFEKLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFVNRDIRSSQVVWGKISMIDAERRLLANALQDPDNQQFVLLSDSCVPLFNFDYIFHYLVHTNISFVDSFRDPGPHGNGRYSEHMLPEVEIKDFRKGAQWFSMKRQHADIVVADHLYYSKFQDFCQPGFEGKNCIADEHYLPTFFKIVDPGGIANWSVTHVDWSERKWHPKSYKAQDVTYGLLKNITSIDVSVHVTSEKKNEVQRWPCLWNGIQKPCYLFARKFTPGTLDNLLQLFSNYSSF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2114 391 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 390 - -
Lja6g2114 391 Pfam Core-2/I-Branching enzyme 106 335 IPR003406 GO:0016020|GO:0016757
Lja6g2114 391 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 390 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2114 Lja-Chr6 49798470 49804655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2114 - - gmx:100817202 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2114 6 49798470 49804655 Lja6g2114 6 49798470 49804655 ECH