Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2073 ATGGCCGCATCTGCGAGAATCACGGTGGCAGCTATGGCGGTGATAGCCTTAGCCGCCTCTCTCTGTTGGGTTTCAGCTTCAGCTTCATCTGTGGGCGAGTTTGTCCACAACACCATCTCTTCTCACAAGATCGTCATCTTTTCCAAGACCTATTGCCCGTACTGCAATAGAGCAAAAGCTGTTTTCAAAGAGTTGAACCAAGTGCCGTATGTTGTTGAGCTTGACGAGAGAGATGATGGATCCAAGATTCAGGATTACTTGATTAACATTGTTGGGAAGCGTACTGTGCCACAAGTTTTCATTAATGGCAAACACCTTGGAGGCTCAGATGATACTGTTGAAGCCTATGAGAGTGGACTTCTAGCTAAACTTCTGGGGATTGAGACACAGGCTCACGATGACCTTTGA 408 0.4681 MAASARITVAAMAVIALAASLCWVSASASSVGEFVHNTISSHKIVIFSKTYCPYCNRAKAVFKELNQVPYVVELDERDDGSKIQDYLINIVGKRTVPQVFINGKHLGGSDDTVEAYESGLLAKLLGIETQAHDDL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2073 135 PANTHER GLUTAREDOXIN 2 8 122 - -
Lja6g2073 135 ProSitePatterns Glutaredoxin active site. 46 61 IPR011767 -
Lja6g2073 135 Gene3D Glutaredoxin 23 126 - -
Lja6g2073 135 CDD GRX_GRXh_1_2_like 43 124 - -
Lja6g2073 135 Pfam Glutaredoxin 44 105 IPR002109 -
Lja6g2073 135 TIGRFAM GRX_euk: glutaredoxin 44 124 IPR011899 -
Lja6g2073 135 PANTHER BNAA02G04900D PROTEIN 8 122 - -
Lja6g2073 135 SUPERFAMILY Thioredoxin-like 33 125 IPR036249 -
Lja6g2073 135 PRINTS Glutaredoxin signature 44 62 IPR014025 -
Lja6g2073 135 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Lja6g2073 135 PRINTS Glutaredoxin signature 103 116 IPR014025 -
Lja6g2073 135 ProSiteProfiles Glutaredoxin domain profile. 32 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2073 Lja-Chr6 49235196 49237455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2073 33 125 Miscellaneous Gene Families AT4G15700 33.333 2.85e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2073 K03676 - gmx:100777703 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2073 6 49235196 49237455 Lja6g2073 6 49235196 49237455 ECH