Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2064 ATGGTGGTGAAGAAACCACGGATTGTGATAATTGGAGCAGGAATGGCAGGCCTAACCGCTGCAAACAAGCTCTACACCGCCACAGGTTCCAAAGACTTGTTTGAGCTCTGTGTGGTGGAAGGTGGAACCAGACTTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACAAGATTGAGATGGGAGCTACCTGGATCCATGGAATTGGTGGCAGCCCAATTCACAAAATAGCTCAAGAAACCAACTCACTCCACTCTGAACAACCTTGGGAGTGCATGGATGGGAACACCAACACTGATGACCCCATCACCATTGCTGAAGGTGGCTTACTCCTTCAACCCTCCATTGTGGATCCTGTCACAAAGCTTTTCAATACCCTCATGGAGTACTCTCAGGGGAAGCAGAAGCTCACTGCAAAAAGTGAGTTTGACAGGTACTATAGCCTTGCTGCTAAAGCTTCCAACATGTCAAAAGGTGCCTCTGGGAACCCCAGTATTGGTTCTTTTCTCAGAAAAGGCCTTGAAGTTTACTGGGATAATGCCTCAGTGAAAGAGATAGAGGATATTCAGCTCAATGGGTTTGGAAACTGGAGCAGGAAGTCACTTGAGCAAGCAGTCTTTGAAATGCATGAGAACAATCAGAGGACTTACACATCAGCTGGTGATTTGAAGAGTCTGGATTATGAGGCAGAAAGTGAGTACATAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGAGAGTGATTGAATCCATAGCTTCTGTGCTACCACCTGGCTTGGTTCAGCTAGGTAGAAAAGTCACAAGAATTGAATGGCAGCCCCAGAGTGATGATGATGGTGATGAAAGGAAGAAGAGCATGGAAAATGGGAGCTTTTCTAGGCCTGTGAAGCTGCATTTTTGTGATGGTTCTGTTATGACTGCTGATCATGTCATTGTCACTGTTTCTCTGGGAGTGTTAAAAGCTGCTATTGGTGATGATTCAGGTATGTTTTGCCCTCCTCTTCCGCCTTCCAAGACTGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTAAGTCCAACACATGGAGGAAAACATGGATTCCCATTCCTGCAAATGGTTTTTCATTCACCTCAATCTGAAATGTGGCATAAGAAAATACCATGGTGGATGAGGAGAACAGCTACCCTTTTCCCCATCTACAACAATTCTAGTGTCCTCTTATCTTGGTTTGCTGGGGATGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATTATCAATGGGGTTACATCCACAGTTTCAAGCTTTCTGTCACATTCTAAGTGGCAACAGGATTCCAGTACTGCAGATAATTTGTGCAATGGGAATGGGAATGGGAATCATGAGGAGAAATCTCATGAAAATGAAGTGAAAGTCAGTAAAGTCTTGAAGACCAAATGGGGAACTGATCCATTGTTTTTAGGTTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATACAATGGCAGAGCCATTGCCATCTAAAGATAGCACTTTCCAGCATCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCTACAACTCATGGAGCTTACTTCAGTGGACTTAGGGAAGCCAATAGGCTTCTTCAACATTACCATTGTGTTGGGATTTAA 1698 0.4364 MVVKKPRIVIIGAGMAGLTAANKLYTATGSKDLFELCVVEGGTRLGGRINTSEFGGDKIEMGATWIHGIGGSPIHKIAQETNSLHSEQPWECMDGNTNTDDPITIAEGGLLLQPSIVDPVTKLFNTLMEYSQGKQKLTAKSEFDRYYSLAAKASNMSKGASGNPSIGSFLRKGLEVYWDNASVKEIEDIQLNGFGNWSRKSLEQAVFEMHENNQRTYTSAGDLKSLDYEAESEYIMFPGEEITIAKGYLRVIESIASVLPPGLVQLGRKVTRIEWQPQSDDDGDERKKSMENGSFSRPVKLHFCDGSVMTADHVIVTVSLGVLKAAIGDDSGMFCPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGKHGFPFLQMVFHSPQSEMWHKKIPWWMRRTATLFPIYNNSSVLLSWFAGDEALALESLKDEEIINGVTSTVSSFLSHSKWQQDSSTADNLCNGNGNGNHEEKSHENEVKVSKVLKTKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPSKDSTFQHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGI* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2064 565 PANTHER POLYAMINE OXIDASE 5-RELATED 1 564 - -
Lja6g2064 565 SUPERFAMILY FAD/NAD(P)-binding domain 3 560 IPR036188 -
Lja6g2064 565 SUPERFAMILY FAD-linked reductases, C-terminal domain 350 497 - -
Lja6g2064 565 MobiDBLite consensus disorder prediction 452 474 - -
Lja6g2064 565 Pfam Flavin containing amine oxidoreductase 15 557 IPR002937 GO:0016491
Lja6g2064 565 PANTHER FLAVIN MONOAMINE OXIDASE 1 564 - -
Lja6g2064 565 Gene3D - 190 446 - -
Lja6g2064 565 Gene3D - 476 503 - -
Lja6g2064 565 Gene3D - 232 348 IPR036188 -
Lja6g2064 565 Gene3D - 2 148 IPR036188 -
Lja6g2064 565 Gene3D - 504 555 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2064 Lja-Chr6 49112318 49114388 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2064 K12259 - gmx:100783032 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2064 6 49112318 49114388 Lja6g2064 6 49112318 49114388 ECH