Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2061 ATGGGTGCTGAAGCTGAAGAAGGAGGTGCTTCAATTACTTCAGTATATGCTACTATGATAGCTAGTTGGCTCACACCGTCGTGTCTATTCATCTTGCTCAACCTTGTCATCGGCACCATCGCTATCACCTCTCGTTCCGCTTGTCAAAAAAGAAGGCAACTCGACTCGTGCGGCGCCCCTTCCCCCTCCCTGCTAGACCGAGTCACCTCCTTCGGACTCGGTTGCTGTAAAATCAAACCAGCAGCAACCGTGTCAGAATCCCAGAGGAGCGTTGTTGACCCGGTCCAGAACAGCGACTCGCCCCGGCTCAACCGGGTCCCCTCGTCCTGTGAAATTGCGAACCCTGCAGCTCCGGACCGGGACCCGAATGAGCTAGGCCAGAATCAACTTCCCTGCGATGGGCTCGACCAGGTCCCCTCCTGTGAAACTGAGAGCCCTGCAGCTCCGGACTGGAATCAACTTCCTCGCGCTCCATCGTTCCTAGAGCGGATTGTGTCTCTGAATTTCCGAAGATCAGATTCGGTGAAATCCGAGAAAGGATCCGGACCCGATGTTACGGGGTTAATGGAAGAGGAGAAAGGCGTGGACGCGAGGGCTGATGATTTTATCAAAAGCTTTAAGCAGCAATTGAGGATGCAGAGGCTTGACTCCATTCTACGTTACAGGAACATGCTCCGAAGAAATTGA 687 0.5342 MGAEAEEGGASITSVYATMIASWLTPSCLFILLNLVIGTIAITSRSACQKRRQLDSCGAPSPSLLDRVTSFGLGCCKIKPAATVSESQRSVVDPVQNSDSPRLNRVPSSCEIANPAAPDRDPNELGQNQLPCDGLDQVPSCETESPAAPDWNQLPRAPSFLERIVSLNFRRSDSVKSEKGSGPDVTGLMEEEKGVDARADDFIKSFKQQLRMQRLDSILRYRNMLRRN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2061 228 PANTHER DUF4408 DOMAIN PROTEIN 17 146 - -
Lja6g2061 228 PANTHER COTTON FIBER (DUF761) 170 227 - -
Lja6g2061 228 PANTHER COTTON FIBER (DUF761) 17 146 - -
Lja6g2061 228 MobiDBLite consensus disorder prediction 87 107 - -
Lja6g2061 228 Pfam Domain of unknown function (DUF4408) 15 45 IPR025520 -
Lja6g2061 228 Pfam Cotton fibre expressed protein 194 227 IPR008480 -
Lja6g2061 228 MobiDBLite consensus disorder prediction 87 129 - -
Lja6g2061 228 PANTHER DUF4408 DOMAIN PROTEIN 170 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2061 Lja-Chr6 49061090 49062767 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2061 - - lja:Lj6g3v1249680.1 457.603