Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2041 ATGGGTGATAACAATTCTCCATCTGGGTCACCAAAACAAGATGCAAAACCAGATCTTGTTGTTGACGGAGGAGACTCCGCAATTCCCAAAGGTGACACTGACACCACCTCGCTGGAAACCATGGTTCGGAGTTTCCAAGATTCCATGTCTGTAGGGAAGACACACAAATTCTGGGAAACTCAGCCTGTCGGCCAATACAAGGATCTCGGCGACACCACGCTACCGGAAGGCCCAATTGAGCCGCCGACACCGCTATCTGAGGTGAAGCAGGAGCCCTACAACCTTCCCAGTGCTTATGAGTGGACCACTTGTGACATGGAATCTGAGGAGACCTGTGATGAGGTTTATCTCCTGCTGAAGAACAATTATGTTGAGGATGATGAGAACATGTTCAGGTTCAATTACTCCAAGGAGTTTCTGAGATGGGCCTTGTGCACTCCTGATTATTATAAATCTTGGCACATTGGGGTTCGTGCGAAATCTTCGAAGAAATTGGTGGCTTTCATCAGTGGTGTCCCTGCGAGGATTAGGGTGAGGGATAATGTTGTGAAGATGGCGGAGATCAATTTCCTGTGTGTGCATAAGAAGCTTAGGTCGAAGAGGCTTGCCCCGGTTATGATCAAGGAGGTTACTAGGAGGGTTCATTTGGAGAATATCTGGCAAGCTTCTTACACTGCTGGGGTTGTGCTTCCGACTCCGATCACGACTTGTCAGTATTGGCACAGGTCGTTGAACCCGAAGAAGCTTATTGATGTTGGATTCTCGAGGCTTGGTGCGAGGATGACGATGAGCCGTACTATCAAGCTTTACAAGCTGCCTGAATCAACTGTCACTCCTGGATTCAGGAAAATGGAGACGCGGGATGTTCCTGCCGTTACGCGGCTGCTGAGGAACTACTTGAGTCAGTTTGTTGTTGCTCCGGAGTTTGATCAGAGTGATGTTGAGCACTGGCTTCTTCCCAATGAGAATGTGGTGGATAGCTACTTGGTTGAGAGCCCTGACAGCCATGAGATTACGGATTTCTGCAGCTTCTACACTCTTCCTTCTTCCATCCTTGGGAATCAGAGTTACTCCACTTTGAAAGCTGCTTATTCTTATTATAATGTGTCTACTAAGACTCCGCTGCCTCAGCTGATGAATGATGCGCTGATTGTGGCGAAGCAGAAGGATTTTGATGTTTTCAATGCCTTGGATGTGATGCATAATGAGAGTTTCCTCAGAGAGCTCAAGTTTGGACCTGGAGATGGACAGCTTCACTACTACTTGTACAATTACCGGATTCGGAGTGCCTTGAAACCATCTGAACTTGGGCTTGTGCTCTTGTAG 1326 0.4774 MGDNNSPSGSPKQDAKPDLVVDGGDSAIPKGDTDTTSLETMVRSFQDSMSVGKTHKFWETQPVGQYKDLGDTTLPEGPIEPPTPLSEVKQEPYNLPSAYEWTTCDMESEETCDEVYLLLKNNYVEDDENMFRFNYSKEFLRWALCTPDYYKSWHIGVRAKSSKKLVAFISGVPARIRVRDNVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQASYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTVTPGFRKMETRDVPAVTRLLRNYLSQFVVAPEFDQSDVEHWLLPNENVVDSYLVESPDSHEITDFCSFYTLPSSILGNQSYSTLKAAYSYYNVSTKTPLPQLMNDALIVAKQKDFDVFNALDVMHNESFLRELKFGPGDGQLHYYLYNYRIRSALKPSELGLVLL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2041 441 PIRSF N-myristl_transf 12 441 IPR000903 GO:0004379|GO:0006499
Lja6g2041 441 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 410 416 IPR022678 GO:0004379
Lja6g2041 441 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 238 IPR016181 -
Lja6g2041 441 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 239 441 IPR016181 -
Lja6g2041 441 MobiDBLite consensus disorder prediction 1 37 - -
Lja6g2041 441 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 78 237 IPR022676 GO:0004379
Lja6g2041 441 Gene3D - 47 441 - -
Lja6g2041 441 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 251 429 IPR022677 GO:0004379
Lja6g2041 441 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 187 195 IPR022678 GO:0004379
Lja6g2041 441 PANTHER N-MYRISTOYL TRANSFERASE 30 441 IPR000903 GO:0004379|GO:0006499
Lja6g2041 441 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 30 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2041 Lja-Chr6 48881441 48883354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2041 1 441 Acyl Lipid Metabolism Gene Families AT5G57020 82.766 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2041 K00671 - gmx:100787291 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2041 6 48881441 48883354 Lja6g2041 6 48881441 48883354 ECH