Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2032 ATGGGGGAGTTGGGGTCTTTCACTGCAGCAGCAGAACCAAACACTCTCCATCATCAAAACAGCGAAACCGATGATCAGAATCTGGAACTAGACATATACCCTTTGAACTGTTACTATTTTGGTTCCAAACATGCCATTCCCTCCAAACCACACTCTTCACCTCATCATCTTCAAAGGGTCAAATCAAACTATGCTGCTCGTGGAATGCGAACTTGTGTGGAAGCTGTGATACTGGTGATTGTTCAAACATCCCATTTGCTGGTGTTGCAAGTGAGGAACTCCATCTACCAACTTCCTGGTGGTCGTTTAAGACCAGGTGAATCAGATATTGATGGATTGAAGCGTAAGCTAGCAAGGAAGCTCTCCCTTAGTGAAGAAGGGGATGGGGCAGAATGGGAGGTGGGTGAATGCCTTGGAACGTGGTGGAGACCTGATTTTGAAACATTAATGTATCCCTTCTTGCCACCTAATGCAAAACAGCCAAAGGAGTGTACAAAACTTTTCCTTGTAAGGCTGCCAGAGAGTCGAAAGTTCATGGTACCAAAGAACCTGAGGTTGCTTTCAGTCCCTTTGTGCCAAATTCATGAAAATCACAAGACATATGGGCCAATTATATCAGGGGTTCCTCAGCTGCTCTCAAAATTCTCTTTCAATATGATTGAATCTTAA 669 0.441 MGELGSFTAAAEPNTLHHQNSETDDQNLELDIYPLNCYYFGSKHAIPSKPHSSPHHLQRVKSNYAARGMRTCVEAVILVIVQTSHLLVLQVRNSIYQLPGGRLRPGESDIDGLKRKLARKLSLSEEGDGAEWEVGECLGTWWRPDFETLMYPFLPPNAKQPKECTKLFLVRLPESRKFMVPKNLRLLSVPLCQIHENHKTYGPIISGVPQLLSKFSFNMIES* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2032 222 MobiDBLite consensus disorder prediction 1 24 - -
Lja6g2032 222 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 12 221 - -
Lja6g2032 222 SUPERFAMILY Nudix 55 177 IPR015797 -
Lja6g2032 222 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 12 221 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lja6g2032 222 PIRSF CPSF-25 6 222 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lja6g2032 222 Pfam Nucleotide hydrolase 29 215 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lja6g2032 222 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 29 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2032 Lja-Chr6 48413959 48415554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2032 K14397 - gmx:100791216 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2032 6 48413959 48415554 Lja6g2032 6 48413959 48415554 ECH