Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2030 ATGCCCCAACCCTTCATCAGCCCTCCACTTCTCATCATTCTCCTCCCCATCCTCGCCTTAACTCTCTTCTTCATCGCCGTGCCACCACTCCTCTCCGCCGCCTCCAACGCTCTCCGCCCTGTCTCCGTCGTCAAGACCAGCTGGGACTCCCTCAACATCCTCCTCGTCGTACTTGCCATCTGCTGCGGCGTATTCGCCAGGCGTAACGACGAGGAGCCATCCCCGCATAACGACGCCGTGCCGGAACAAAATGGAGCTTCATCGTCGTCGGTGGAAAGAGTTGGCTACGAGCTGCCGTCGCCGCCGCAGCAGCAGCACTGGTTTGGATTCCCTGATGAGACGAAGGTCTACGATGCCGCCACCCCGACAACCGGCGTTACCCGGCTGAGAAGGAGCAGCAGCTCGTACCCAGATCTGCGGCAGTGGGATTCCGGCGACGAGCGTTACCAGTTTCGCTTCTTCGATGACTTCGAAATCGACAAGCAGACGCAGTCACGCTCGCCGCTGGTGGAGCACCGTCAACGGTGGCCGGAACCGGAAACTCATGAAGACAAAGAAGAAGAAGTTCGAGTTAAGGAAATCCCGGTGGATACCTTTGAAGTTCGTCCTCCACCGCATGTGAAGTCAGCCGCGCCTCCTCCTCCTCCTCCGCCACCGCCACCGCCGCCTCCTCCGGCGGCGGACTCAGCTCGTCGAAATCCGAGACGGACACCTCCGAAGATGGAAAATGAAATAACTGAAGTGGATGATAGCGAGTTCACGAGGGTCCAGTCTCCTCCGACGCCACCGTCACCTCCGCGGCTGTCGGTGAAAGCACGTTCGGAGCACAAGAAGAGTGAGCGAAGGAAGAGTAACGTGAAGAGGGAGATAGCGATGGTTTGGGCTTCAGTACTCTCCAACCCGAGAAAGCGAAAGAAGAAACAGAGAGCCAAAACCGATGAAAGTCACAGTCAACATTACCAAAATGTTGATGAAGTAACAAACAACACGGCAGCGCCACCACCTCCGCCGCCACCGCCACCGCCACCTCCGCCTCCGCCGTCAGTTTTTCACAGTTTGTTTAGAAAGGGACTGGGGAAGAATAAGAAAATTCATTCATTGTCAGCGCCGCCACCACCGCCGCCGCTGCCGCCGTTGACGTCTTCCCGGAGATGGTCAACACGCAAGAGCCAGATCCCAATGCCGCCGGCTCCTCCGCCGGAGCCACCCCGCCGGAGAAACTCCGGGAGGCCACCATTGCCAAACAAGGTAGACAATAGCAACTCCGTCCATGAGGCCATAAACACCGGCAACCAGTCGCCACTGATTCCGGCCCCGCCGCCGCCTCCGCCATTCAAGATGACTGCAATGAAGTTCACTGTTCGTGGTGGTTTTGTTAATGTACGTAGCAACCAGAGCTCGCGAAGTAGCTCGCCGGAAAGGGAGCACATTGATGTGGAAGTGGCAAACATGACTACTAGTACAACCACCACCAACACTGCCACCGCCACCGCTGAAGTGGGTGGGCCCGTTTTCTGTCCCAGCCCTGATGTGAATTTGAAGGCTGCAACTTTCATTGCTCGGCTGAGGGGAGAGTGGAGGCTGGAGAAGCTCAACTCTATCAAGGAGAAAAGCAATGGCTCATTGCCTCCTCCTGTTTAA 1641 0.5722 MPQPFISPPLLIILLPILALTLFFIAVPPLLSAASNALRPVSVVKTSWDSLNILLVVLAICCGVFARRNDEEPSPHNDAVPEQNGASSSSVERVGYELPSPPQQQHWFGFPDETKVYDAATPTTGVTRLRRSSSSYPDLRQWDSGDERYQFRFFDDFEIDKQTQSRSPLVEHRQRWPEPETHEDKEEEVRVKEIPVDTFEVRPPPHVKSAAPPPPPPPPPPPPPPAADSARRNPRRTPPKMENEITEVDDSEFTRVQSPPTPPSPPRLSVKARSEHKKSERRKSNVKREIAMVWASVLSNPRKRKKKQRAKTDESHSQHYQNVDEVTNNTAAPPPPPPPPPPPPPPPSVFHSLFRKGLGKNKKIHSLSAPPPPPPLPPLTSSRRWSTRKSQIPMPPAPPPEPPRRRNSGRPPLPNKVDNSNSVHEAINTGNQSPLIPAPPPPPPFKMTAMKFTVRGGFVNVRSNQSSRSSSPEREHIDVEVANMTTSTTTTNTATATAEVGGPVFCPSPDVNLKAATFIARLRGEWRLEKLNSIKEKSNGSLPPPV* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2030 546 MobiDBLite consensus disorder prediction 163 199 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 330 350 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 206 229 - -
Lja6g2030 546 PANTHER COTTON FIBER (DUF761) 4 537 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 413 433 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 71 96 - -
Lja6g2030 546 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 4 537 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 392 409 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 163 447 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 233 251 - -
Lja6g2030 546 MobiDBLite consensus disorder prediction 80 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2030 - - mtr:MTR_2g040580 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2030 6 48397404 48399516 Lja6g2030 6 48397404 48399516 ECH