Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2016 ATGGAGAATGACACATTCTCTGGTGTTGGACACGGTATACTACAGCAGATTGATGGCAAGGTGTTGCATACGTTTCAGAAGAGCTTTGTTCAAGTACAGAACATCTTGGATCAGAACAGGGTTCTCATCAATGAGATAAACCAGAATCATGAGTCTAAGGTCCCTGACAACCTTAACAGGAATGTGGGACTTATTAAAGAGCTCAACAACAACATAAGAAGAGTGGTTGACTTGTATGCAGATCTTTCAAGTTCCTTCACGAAATCCATTGATGTTAATTCTGAGGGGGATTCAAGTGGTGCTGTGAAATCAGATGGGAAAGCTTGCCACAAGCGAAACAGGCCTACATAG 351 0.4217 MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNRNVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNRPT* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2016 116 PANTHER PROTEIN ELF4-LIKE 3 1 115 - -
Lja6g2016 116 MobiDBLite consensus disorder prediction 91 116 - -
Lja6g2016 116 Pfam Early Flowering 4 domain 16 97 IPR009741 -
Lja6g2016 116 PANTHER PROTEIN ELF4-LIKE 4 1 115 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2016 Lja-Chr6 48257262 48259783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2016 - - rcu:125369405 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2016 6 48257262 48259783 Lja6g2016 6 48257262 48259783 ECH
Lja4g1530 4 14281146 14283223 Lja6g2016 6 48257262 48259783 PCT