Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2004 ATGGTAGCCATGGCCGGCGGCGCCAAGAGAATCCGAACCTACGAAGAGTTCGCCCAAGTCCACGCACTGTTACTCGCGTCGTCAGGACTACCGCAGTCACTTTTCCGCCGCCTCTTCCAAAAGCTCGCCGGCGAGACCTTCGACGGCGGAAACCACTTCCAAATCGAGCCCTGCGAGGACGGACGCATGAGACGCCTCGTTCTCACCTCCGATTCCATGCCCAAGGACTCCGACGTCTTCCTCATCGATCACGCATGGACCTTCCGACTCCCCGACGCTTACAACCAGCTGCTTGAAGTTCCGGGATTGGCTGAGAGGATGGGTTCTTTGATGTGTGTGGATATTGATATGAATTTGGAAGGTGAAGGTGAGGTTAGTGAGAAGCCTGATGTATTGGAAGTTCTCGAAAGCGAGGTTCGCGAGACGAAAGAGAAAGGAGATGGTAAATTGAGATGGTTGGAGCTTGAAGGACTTGACATTGATGATGATATGCTTTTGTCTCTTGACTTATCTTCAAAATTTCCTGATTTAGTGTCGCTTAGCCTATACGGAAACAAGCTCAATAGAGCCGAAGTGGTTGTTCAGGAAGTTAGCAAATTTAAGCATCTTAAAGGACTGTGGCTGAACAATAATCTGGTGCTTAAAGAGTGTAATGACAAAATTGCAGGTGCCATTCTTAAGGAGTTACCTGAACTGGAGATATATAATTCAAATTTTACAAGCAATTTTGGGGAATGGGCCTTGGGCTTTTGTGCAGGGATATATGAAAAGGATAACCCAGCAAGTTCTGATCATGCTGATAGCCCGCTGCAGAGTGTGTCCACTCTTGATATTTCTAATAGAAACATTCATAATTTAATCAACAAGGCATTTTCACCCATTTTATTTTCATCTCTATCACACTTGAACATTCATGGAAATCCGTTGGAGCAAAACTCGGTTGGTGACTTGTTAGATTTGCTGAGGAGATTCCCTTGCTTATGTTCATTGGGGGTAGATATTCCTGGTCCTCTTGGAGGAAGTGCCATTGAAATCCTGGAATCTCTTCCGAACATTTCTGAACTAAATGGTATTAGTGCATCCCAAATATTGGAAACTAGTAAGCAGGTCATTGATTCAGCACTTCTTCCTCGTGTTTCTGAATGGACTCCTGATGAGCCTCTTGCTGACCGTATTGTAAATGGAATGTGGAAATATCTAATGACTTATAGACTTGCAGATGAAGAAAAGTTAGATGAGACGTCTGTATGGTATGTGATGGATGAGCTTGGTTCTGCTTTGCGGCACAGTGATGAGCCAAATTTCAGAGTGGCACCTTTTCTTTTCATGCCAGAGGGTAATCTGGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACTCAAAATTTGCAGAAAGGTGATGAATGCACTCGAGATTTTCTTCTTGGTATCGGGGAGGATAAACAACGTTCTGCTAGACTTACTGCCTGGTTCCACACACCAGAGAACTATTTTATCCAAGAGTTTGAGAAGCACAATCAGAAATTGGGATCCACAAGTTTGATCCCACCCACTGTGCAGTCTTCTGAGACTAGAAGTATTCATCAACCTGATGGGCGTCCTTTACGTGTTTACACAGATATACCTCATGTGGAAGAAAACTTGACGCATCCGGAGTTTGCAATTACAAAGGAACCAAAAGATGCAGATATAATATGGACATGTATGCAGATAGATGAGGATACAAAGAAGGCCACAGGAATAACAGATCAGCAATACATTAATCAATTTCCTTTTGAGGCTTGTCTTGTCATGAAACATCATTTAGCGGAGACAATTCAGAAGGCACTTGGATCTCCTCAATGGTTGCAGCATACTTATAATCTTGAAACACATCTATCTCAACTTATTGGTGACTATTATTTACGCAAAAGAGAAGGACAAGACAATCTTTGGATCCTAAAACCCTGGAACATGGCCCGAACTATTGATACTACTGTAACTGATAATTTACCTGCGATAATCCGTCTCATGGAAACTGGTCCAAAAATTTGCCAGAAGTATATTGAAAAACCTGCTTTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATAGTGTTGGTTCGGAGCATGCACCCTTTGGAGATATTCCTGTCAGATTGCTTCTGGGTCAGGATAGCCAACAACCAATATTCTTTGGAAAGACGTAGTTTATTTGAATATGAAACTCATTTCACTGTCATGAATTACCGTGGAAAAATAAATCACAAGAATATCAAGGATTTTGTGAAGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACATACAAGAGTAAGGAATATGATTCGATCAGTGTTTGAGGCAGCCGCTGTTGCACATCCAGAGATGCATAGTCCAACATCAAGAGCAATGTACGGTGTAGATGTTATGTTGAACAGCTCTTTCCAACCCAAGTTACTAGAGGTGACGTACTGCCCTGATTGTACAAGAGCTTGCAAATATGACATGGATATCGTGGTTGGAGAGGGAGGTGTTTCCAAAGGTTGTGATTTCTTCAACAATGTCTTCAGGTGTCTCTTTTTGGATGAAATTTCGCAAGTTAGCCCATTGTAG 2601 0.4256 MVAMAGGAKRIRTYEEFAQVHALLLASSGLPQSLFRRLFQKLAGETFDGGNHFQIEPCEDGRMRRLVLTSDSMPKDSDVFLIDHAWTFRLPDAYNQLLEVPGLAERMGSLMCVDIDMNLEGEGEVSEKPDVLEVLESEVRETKEKGDGKLRWLELEGLDIDDDMLLSLDLSSKFPDLVSLSLYGNKLNRAEVVVQEVSKFKHLKGLWLNNNLVLKECNDKIAGAILKELPELEIYNSNFTSNFGEWALGFCAGIYEKDNPASSDHADSPLQSVSTLDISNRNIHNLINKAFSPILFSSLSHLNIHGNPLEQNSVGDLLDLLRRFPCLCSLGVDIPGPLGGSAIEILESLPNISELNGISASQILETSKQVIDSALLPRVSEWTPDEPLADRIVNGMWKYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNLQKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIQEFEKHNQKLGSTSLIPPTVQSSETRSIHQPDGRPLRVYTDIPHVEENLTHPEFAITKEPKDADIIWTCMQIDEDTKKATGITDQQYINQFPFEACLVMKHHLAETIQKALGSPQWLQHTYNLETHLSQLIGDYYLRKREGQDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEKPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLERRSLFEYETHFTVMNYRGKINHKNIKDFVKEFEEEHQVKWLDIHTRVRNMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLNSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVSKGCDFFNNVFRCLFLDEISQVSPL* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2004 866 Pfam Tubulin-tyrosine ligase family 584 834 IPR004344 GO:0036211
Lja6g2004 866 Gene3D Ribonuclease Inhibitor 133 373 IPR032675 -
Lja6g2004 866 Gene3D - 660 840 - -
Lja6g2004 866 SUPERFAMILY RNI-like 149 357 - -
Lja6g2004 866 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 9 865 IPR027749 -
Lja6g2004 866 ProSiteProfiles TTL domain profile. 530 866 IPR004344 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2004 K16609 - gmx:100809212 1479.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2004 6 48025945 48032836 Lja6g2004 6 48025945 48032836 ECH