Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1995 ATGGGTTCTGATAACAACGATCTAAGCTTCTTGAACGAAATTGGTTTGGGTTCCTCCAACATTGGCTGTTACATCAATGGAAAATGGAAGGCCACTGGTTCATCTGCCACTTCTGTCAACCCTTCCAACAATCAGACTACTGCTACTGTGACCGAGGCAAGCATTCAAGATTATGAGGAGGGTTTGCAGGCTTGCAGTGAAGCAGCTAAGACATGGATGACTGTTCCGGCGCCGAAAAGGGGTGAGATTGTCAGGCAGATTGGTGAGGCCTTAAGGGCCAAGTTGGATCCTCTGGGTAGGCTGGTGTCTCTTGAGATGGGGAAAATTCTTCCAGAAGGAATTGGGGAGGTTCAGGAGTTTATTGACATGTGTGATTATGCTGTTGGGCTGAGCCGACAATTGAATGGATCGATTATACCATCAGAACGTCCAGATCACATGATGTTTGAGGTATGGAACCCACTAGGAATAGTTGGTGTAATCACTGCTTTCAACTTTCCATGTGCTGTTCTGGGGTGGAATGCTTGCATTGCATTAGTCTGCGGTAACTGTGTTGTATGGAAGGGTGCTCCAACAACTCCATTAATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAGGAACAACTTACCAGGTGCGATATTTACCTCTTTCTGTGGAGGCGCTGACATTGGTCAAGCGATTGCGAAAGACACCCGCATTCCCCTGGTTTCATTTACTGGAAGTTCAAAGGTTGGCTTGTCGGTTCAGCAAACTGTTAATGAAAGATTTGGCAAATGCTTGCTTGAGTTAAGTGGTAACAATGCAATAATCGTCATGGATGATGCAGACATCAAACTGGCTGTACGCTCTATTTTGTTTGCTGCTGTGGGTACTGCTGGTCAGCGGTGTACTACCTGCCGTAGACTGTTTCTGCATGAAAGTATCTACACAAATGCGCTAAATCAACTAAGTGAAGCCTACAAACAAGTCAAAATTGGGAACCCCCTGGAGAATGGGATTCTAGTTGGGCCTTTGCATACGCGCTCTTCAGCTGAAAACTTTCAGAAGGGCATTTCAGTCATAAAGTCTCAGGGAGGGAAGATCCTAACTGGGGGATCTGTATTAGAGTCAGAAGGAAATTTTGTACAACCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAGAATTATTTGGTCCAGTTCTCTATGTTATGAAATTTAAGACTCTGGAAGAAGCAATTGCCTTGAACAACTCTGTACCTCAAGGATTGAGCAGTTCAATCTTTACACAAACACCTGGATCTATATTCAAATGGATCGGGGCACGGGGTAGTGATTGCGGTATAGTGAATGTTAACATACCAACAAATGGAGCTGAGATTGGAGGTGCCTTTGGTGGAGAAAAGGGAACTGGTGGTGGCCGCGAAGCAGGAAGTGACTCGTGGAAGCAATACATGCGGCGTTCTACATGTACCATCAATTATGGAAGTGAACTACCCTTAGCTCAGGGAATCAACTTTGGTTAA 1527 0.4473 MGSDNNDLSFLNEIGLGSSNIGCYINGKWKATGSSATSVNPSNNQTTATVTEASIQDYEEGLQACSEAAKTWMTVPAPKRGEIVRQIGEALRAKLDPLGRLVSLEMGKILPEGIGEVQEFIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLERNNLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSSKVGLSVQQTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNALNQLSEAYKQVKIGNPLENGILVGPLHTRSSAENFQKGISVIKSQGGKILTGGSVLESEGNFVQPTIVEISPDAPVVKEELFGPVLYVMKFKTLEEAIALNNSVPQGLSSSIFTQTPGSIFKWIGARGSDCGIVNVNIPTNGAEIGGAFGGEKGTGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1995 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Lja6g1995 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 - -
Lja6g1995 508 Pfam Aldehyde dehydrogenase family 34 488 IPR015590 GO:0016491
Lja6g1995 508 CDD ALDH_F7_AASADH 23 496 - -
Lja6g1995 508 SUPERFAMILY ALDH-like 20 497 IPR016161 GO:0016491
Lja6g1995 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 485 IPR016162 GO:0016491
Lja6g1995 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 IPR044638 GO:0004029
Lja6g1995 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1995 Lja-Chr6 47916702 47921062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1995 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 80.118 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1995 K14085 - gmx:100811186 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1995 6 47916702 47921062 Lja6g1995 6 47916702 47921062 ECH