Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1994 ATGGCTTCCAATCCGACTACTCAACCTTTCTCTACTGGAAAATGTGTAACACTAAGCTCAAGCTTAGTTCTAGCAGCTTTAGTTGCTCTCACAGTACAAGTCTTCTACTTCTCACCCATAGATCCAGTTTTGCTTGACATAACCCCTGCACCTTCAACCAAAAACAACAAATTACAGAATGTCAGTAAGCTTGGAGAAGGACTTCTGAAACAACCAGAAGATGTTTGCTTTGATGAAGAGGGTACTCTCTATACAGCTACTCGAGATGGTTGGATTAAAAGACTGCGCAGGAATGGAAATTGGGAGAATTGGAAGCATATAGATAGTCATGCTTTGCTTGGGATAACAGCAGCAAAAGATGGGGGTCTCATTGTGTGTGATGCTAACAAGGGTTTGCTAAAGGTTACAGAAGAGGGTTTCAGTGTTCTCACTACACAAGTAAATGGTTCTCCAATGAGGTTCGCAGATGATGTGATAGAAGCATCAGATGGAGATATATATTTCAGTGATGCCAGTACCAAATTTGGTTTTGGTAACTGGTATCTGGAAATGCTAGAGGCCAGACCTCATGGACGAGTTCTCAAATACAACCCTGTATCAAATGAGACAACTATTGTCCTTGATAACTTGGCCTTTGCCAATGGTGTTGCTCTCTCTAAAGATCAAGATTATCTTGTGGTCTGCGAAACTTGGAAGTTCAGATGTACGAGGCATTGGCTAAAAGGAGCAAACAAAGGCAAAACAGATATTTTCATAGAAAACCTCCCAGGTGCACCTGATAACATTAATCTAGCTCCTGATGGCTCTTTCTGGATTGCTTTACTTCAGATTACTTCTGAAGGACTGGGGTTTGTGCACACCTCCAAGGTATCCAAGCACGTGGTAGCTTCATTTCCATGGCTATTTAACTTGGTCAACGGTGCAAGAAAATCAGCAATGGTGGCGAATGTGGCAACAGACGGCAAGATACTCAGAACGTTTGATGATAGTGAGGGGAAGGTGCTAAGTATGGTTACTTCAGCCGTGGAGTTTGAGGACCATCTTTACTTAGGTAGTCTTAATACCAATTTTGTTGGAAAATTATCACTCCACAGTGCACAAAACCAGTGA 1110 0.4207 MASNPTTQPFSTGKCVTLSSSLVLAALVALTVQVFYFSPIDPVLLDITPAPSTKNNKLQNVSKLGEGLLKQPEDVCFDEEGTLYTATRDGWIKRLRRNGNWENWKHIDSHALLGITAAKDGGLIVCDANKGLLKVTEEGFSVLTTQVNGSPMRFADDVIEASDGDIYFSDASTKFGFGNWYLEMLEARPHGRVLKYNPVSNETTIVLDNLAFANGVALSKDQDYLVVCETWKFRCTRHWLKGANKGKTDIFIENLPGAPDNINLAPDGSFWIALLQITSEGLGFVHTSKVSKHVVASFPWLFNLVNGARKSAMVANVATDGKILRTFDDSEGKVLSMVTSAVEFEDHLYLGSLNTNFVGKLSLHSAQNQ* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1994 369 Gene3D - 57 369 IPR011042 -
Lja6g1994 369 PANTHER STRICTOSIDINE SYNTHASE-RELATED 20 364 - -
Lja6g1994 369 Pfam Strictosidine synthase-like, N-terminal 54 95 - -
Lja6g1994 369 Pfam Strictosidine synthase 160 242 IPR018119 GO:0009058|GO:0016844
Lja6g1994 369 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 20 364 - -
Lja6g1994 369 SUPERFAMILY Calcium-dependent phosphotriesterase 36 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1994 Lja-Chr6 47911047 47914430 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1994 - - mtr:MTR_2g042430 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1994 6 47911047 47914430 Lja6g1994 6 47911047 47914430 ECH