Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1989 ATGGCATCACCAAATAAATATTTCTCACACTATGAAGGAATATACACAAATCTTCACGAACCCGCTCTCATAATTGCGGGGTGTTCAGTGCTTGTAGCTCTAGTTCTCTCCATTGTTCTTATTCTACAACATCTCAGATCATATACCAAACCTGAGGAACAGAAGTGGATTGTTGCTGTTATTTCTATGGTCCCAATCTATGCTACTGAGTCTATTATTTCTTTGTGGAATCCAAAATTATCTCTTGCATGTGACATTTTGAGAAACTACTATGAAGCCTTTGCTCTGTACTCTTTTGGAAGATATCTAATTGCTTGTCTTGGTGGTGAAGGAAGGGTTGTGGAACTACTTGAAGATGAATCTGGAGGACACCTTAGAAAACCTTTGTTGAATGGTTTAGATGAGAATCGCAGCACAGAAGACAGATCGTTTTGCAACTTCTTTTGGCGGCCGTGCAAACTTGGAAAAGATCTTCTGGCAATACAAAAATTTGGTCTTGTGCAATATATGATTCTGAAGACTGTTTGTGCATTCTTAGCATTAATATTGGAACTGTGTGGTGTTTATGGTGATGGGGAATTCAAGTGGTACTACGGGTATCCATATATAGCAGCAGTATTGAACTTCAGCCAGATGTGGGCATTATACTGCCTTGTGCAGTTCTATAATGTTACTCATGAGAGACTTCAACCAATAAAGCCACTTGCAAAGTTCATCAGCTTTAAGGCTATTGTGTTCGCTACATGGTGGCAAGGCGTAGGTATCGTGCTGTTGTGTACATTTGGAGTGCTACCTCAGCAGGAGAAACTACAAACTGGACTGCAGGATTTCTTAATTTGTATCGAGATGGCCATTGCAGCTATTGCTCACGTGTTTGTATTTTCCGCCAAACCATATTATCTTCTTCCTGCTGCTTCTGCATGTGGAAAAGTCACAAAGGAAACAACAGAAGCAGCCATAGCGATCAATGAAGGGGACGAGCAGAAACCAGCTGCATTGCTTAAAGAGACAACTACAGAAGTTGAGGCTCCAAGAACAAGCGTCAAAGAGAGCGTCCAGGATATTGTTGTTGGAGGTGGTCAACGGGTTGTCAATGATGTCGTGCTGACGATAAATCAAGCCATAGGGCCTGTGGAAAAGGGAGTGACGAGGATTCAGCAGACCTTCCATCACAAAACAGTGGTTTCATCAGATGACGAGGAAGAAGAAGAAGAAGAATCAGAAGTGAAAGTTGAGAAAGATGTCACAGAAATCGTATAG 1260 0.4159 MASPNKYFSHYEGIYTNLHEPALIIAGCSVLVALVLSIVLILQHLRSYTKPEEQKWIVAVISMVPIYATESIISLWNPKLSLACDILRNYYEAFALYSFGRYLIACLGGEGRVVELLEDESGGHLRKPLLNGLDENRSTEDRSFCNFFWRPCKLGKDLLAIQKFGLVQYMILKTVCAFLALILELCGVYGDGEFKWYYGYPYIAAVLNFSQMWALYCLVQFYNVTHERLQPIKPLAKFISFKAIVFATWWQGVGIVLLCTFGVLPQQEKLQTGLQDFLICIEMAIAAIAHVFVFSAKPYYLLPAASACGKVTKETTEAAIAINEGDEQKPAALLKETTTEVEAPRTSVKESVQDIVVGGGQRVVNDVVLTINQAIGPVEKGVTRIQQTFHHKTVVSSDDEEEEEEESEVKVEKDVTEIV* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1989 419 MobiDBLite consensus disorder prediction 393 419 - -
Lja6g1989 419 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 21 409 IPR005178 -
Lja6g1989 419 PANTHER TRANSMEMBRANE PROTEIN 184C 21 409 - -
Lja6g1989 419 Pfam Organic solute transporter Ostalpha 23 299 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1989 Lja-Chr6 47872436 47875972 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1989 - - aprc:113852334 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1989 6 47872436 47875972 Lja6g1989 6 47872436 47875972 ECH