Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1959 ATGACCGCGCCCAAGAAAAATCACAAGGAGAAACCAATTCGCCGCAAGGAAGAGAAACCGGAAGAGCCGGAACTTCCGAAATATAGAGATCGAGCTAAAGAGCGTAGAGAGGATCAGAATCCTGATTATGAGCAAACTGAACTTGGATTTCATGCTGTTGCTCCTCCTGGTACTGTAGATCCCCGGTCATCTGATGCACACAAATTATCTATTGAGAAGAGCAAGTACCTAGGAGGTGATGTGGAGCACACACATTTGGTCAAAGGTTTGGATTATGCTTTGCTGAATAAAGTAAGAAGTGAGATTGTTAAGAAGCCAGATGCTGTTGATGATGTTGATGGGAAATCCAGAGCATCTAAGGAAGACCAACAAGTATCAATTCGCACAGCAACTGCAAAGTCAGTTTATCAGTGGATTGTGAAGCCTCAGACCATTATTAAGACGAATGAGATGTTCCTGCCTGGTCGAATGACATTTATTTATGACATGGATAGTGGATTTCATCATGATATTCCAACAACCTTGCACCGCAGTAAAGCTGACTGTCCAGTGCCAGAGGAAATGGTTACAGTTAATGTTGACGGGTCTGTTCTAGATCGAATTGCTAAAATAATGACTTATCTTCGTCTTGGTTCTTCTGGGAAAGTCTTAAAGAAGAAAAAGAAAGAAAAAGATGTAAAAGGTAAAATTTTGGCTGCTGGTAATGGATATGACAAAGAGGATAAGCCAACAAAGGTTGAAGGTGGGGGGTTAAAGAATCAAACCGAAAGTGAATTCCTTCCGCCACCTCCACCTCCACCTCCCATAAAGAAAAATCCACTTAATTCAAGAGAGAAACAAGGCCCAGCTGTTGCTAGAACAGATGATGATGACATTTTTGTAGGTGATGGTGTTGAGTATGAGATACCTGGTAAAGACCCGAGCCAGAGTCCTGTCTCTGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAAACTTCATATTTCACTGAACCTAGTTATGGTCCTGTCCCACCCTCCATGCTGCCTCAAGTGTGGCAAGAACCGAATGGATATGATGTAATGCAAACACAAGCCTTGGCTGGTGGCTACCAAGGAGAGTGGCAGGAGTACCAGTATGTTGAACAACTGGCTTACCCAGATCAATATCTTCAGCCAGACATGCAGACTTATGATGCACAAGCAGATTTAAATATTCCACAGGATCCACGCTTCATGACTCAAGAAGAAAAAGATCGAGGTTTAGGATCAGTGTTTAAACGAGATGACCAGAGACTTCAACAGCTTAGGGAGAAAGATGCTCGTGAAAAAGATCCCAACTTCATCTCGGAGAGTTACTCTGAATGTTACCCTGGGTATCAAGAATATAACCGTGAGGTAGTGGACAGTGATGATGAAGCCGACTTGTCCAAAATGGATATGGGTGGAAGGGCAAAGGGACGTCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCCACATACAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTTGGTGTGAAGATGCAAGATGGGCGAAAGACACGAAAGCAAAACAAGGATCAGAAGCTCAACAATGACTTGCATAAGATCAATAAGATACTTGCCAGAAAGAAGATGGAGAAGGATGGTGGGAATGATGAGGGTGGCCAACAATATGATGACTCACCTCAACCTGGAAAGAAGCTTAGAGTATGA 1713 0.4314 MTAPKKNHKEKPIRRKEEKPEEPELPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDPRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIVKKPDAVDDVDGKSRASKEDQQVSIRTATAKSVYQWIVKPQTIIKTNEMFLPGRMTFIYDMDSGFHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMTYLRLGSSGKVLKKKKKEKDVKGKILAAGNGYDKEDKPTKVEGGGLKNQTESEFLPPPPPPPPIKKNPLNSREKQGPAVARTDDDDIFVGDGVEYEIPGKDPSQSPVSEDMEESPRNKEKTSYFTEPSYGPVPPSMLPQVWQEPNGYDVMQTQALAGGYQGEWQEYQYVEQLAYPDQYLQPDMQTYDAQADLNIPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREVVDSDDEADLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEKDGGNDEGGQQYDDSPQPGKKLRV* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1959 570 PANTHER PROTEIN RED 5 569 - -
Lja6g1959 570 MobiDBLite consensus disorder prediction 1 67 - -
Lja6g1959 570 MobiDBLite consensus disorder prediction 515 554 - -
Lja6g1959 570 MobiDBLite consensus disorder prediction 258 272 - -
Lja6g1959 570 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 5 569 IPR039896 -
Lja6g1959 570 MobiDBLite consensus disorder prediction 234 345 - -
Lja6g1959 570 MobiDBLite consensus disorder prediction 1 44 - -
Lja6g1959 570 Pfam RED-like protein C-terminal region 446 552 IPR012492 -
Lja6g1959 570 MobiDBLite consensus disorder prediction 514 570 - -
Lja6g1959 570 Pfam RED-like protein N-terminal region 5 221 IPR012916 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1959 K13109 - gmx:100775354 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1959 6 47470370 47475484 Lja6g1959 6 47470370 47475484 ECH