Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1952 ATGTCGCCGTCCGCCGAAGATCCCGGCGGAGCCTGCCTATCCGACCCGCCGGAGACCAACGGCTTCCACAATGACACCAATACGCCGGACGAACCGACCTCTCCTACCGCGCCGCCGCCGCGTCTCCGTTCCCTCCGCCGCGCAGCCGCGCCGGAGAAGCTTCGGAAAGTCGCCGTCGCATCGGCGAAGGGCTTCTCGATCGGAGCTGGTCTCAAGGGCGGTCTCGCTCTCTTCGCGATCCTGGCGCGACTCACGCGGAAAAAGCCGCCAAGGAAGGAGATTGTGGTGTCAAATAGTGAAGCCATTGTTACTGCTTTGAAGGAGACACTGAGATACGGTCTCTTCCTTGGAACCTTCGCCGGAACGTTTGTGTCAATGGATGAGCTTATAGCTGCTGTTGGAGGCCATCGCAGGACAGGGAAGTGGAGGGCTATGTTGGCTGGGGCGGTTGCTGGGCATTCGATGCTTTTGACGGGGTTAGAGGCGCAGCACACGAGCTTGGCTATTTATATTCTCATGCGGGCTGCTGTCTTGGCATCTCGTTGTGGGATTAAGAGTGAGCGGTTTGGGAGAATTTGTAAGCCTCTCACGTGGAAGCATGGTGACATTTTCCTCATGTGTCTCTCCTCTTCGCAAATATTGTCTGCTTATATATTAAAGCAAGAGAGTTTGCCTGCATCATATAAATCCTTTCTCAATAAACATGGTGGAAAGGATCCAGTTATCTTACAAGGTGTAAAAGATATAGCCAGTGGCAAGCCATTTACTAATTTGGATGCAATAGAGAAATACTACAAGACCGTGGGTGTCGATGTGAAATTAGATCCAAATATGAAAGTCCCATGCTCGATTGTACATGGGAATCAATCATGTGGGGGGCACGTCCTTTCTTTTCTTCTTCAAGCCTACAAAAGAGCATTACCTGTTTATCTTCCGGTTTATCTGATACCTGCTCTAATAGTTCATAGAAAAGGACTTCTACAAAGGCCTAACACAATATTGGCCAAGGGTCTTGTTGGCACTGCGAGATCAAGCTTGTTTCTGTCTGTGTATTGCACATCTGCTTGGATGTGGACATGCTTTCTATTCAGGATCTTCAGAAGATGTAACGTTCCAATGGTGGCCATGGGAACATTCCCTACTGGCCTTGCTCTGGCCATTGAGAAGAAAAGCAGACGAATAGAGATATCATTATACTGCCTTGCTCGGGCTATTGAGAGCTTCTTCACATGCATAGCTGATGCAGGATATCTGCCACAATCAAGAAGGATTAAGAGAGCTGATGTGATGGTTTTTAGCTTGTCAACAGCCATCATAATGCACTGCTATGCACAGGAGAGGGAAGTTTTCAAATCCAAATATTTGAATGTTCTTGATTGGGTGTTTGGTGTCCCTCCTCCTCCATGTGAAACCCCGCGATACAAAGATGCATAG 1434 0.4888 MSPSAEDPGGACLSDPPETNGFHNDTNTPDEPTSPTAPPPRLRSLRRAAAPEKLRKVAVASAKGFSIGAGLKGGLALFAILARLTRKKPPRKEIVVSNSEAIVTALKETLRYGLFLGTFAGTFVSMDELIAAVGGHRRTGKWRAMLAGAVAGHSMLLTGLEAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTWKHGDIFLMCLSSSQILSAYILKQESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLDAIEKYYKTVGVDVKLDPNMKVPCSIVHGNQSCGGHVLSFLLQAYKRALPVYLPVYLIPALIVHRKGLLQRPNTILAKGLVGTARSSLFLSVYCTSAWMWTCFLFRIFRRCNVPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVMVFSLSTAIIMHCYAQEREVFKSKYLNVLDWVFGVPPPPCETPRYKDA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1952 477 PANTHER UNCHARACTERIZED 44 469 IPR026749 -
Lja6g1952 477 PANTHER BNAANNG02190D PROTEIN 44 469 - -
Lja6g1952 477 Pfam N-terminal cysteine-rich region of Transmembrane protein 135 290 410 IPR031926 -
Lja6g1952 477 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1952 Lja-Chr6 47363513 47368591 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1952 - - lja:Lj6g3v1139640.1 778.089