Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1941 ATGGTTGCTTCTTCCCTCTCCTTTCTCCATTCCTGCGCATTCCCCTCTTCTTCTTCTTCCTCTTCCTTGTTCACAACTTCAACACCCAATCCAAACTCGTTACCCTTTGTGGTTGAAGCCAAATCCAGGACCCGAACAGATGACAGGACTGCTCGTCACGCCCGCATCCGCAAGAAGGTTGAAGGGACTCCTGAAAGACCAAGATTGGCTGTCTTCCGCTCCAACAAGCATCTTGCTGTCCAGGTGATAGATGACACCAAGATGCACACGCTTGCTTCAGCTTCCACAATGCAGAAGGCAATTGCGGAAGAGTTCAGCTACACTGCTGGCCCTACAATCGAAGTAGCGAAGAAGGTGGGTGAGATCATTGCAAAATCCTGTCTGGAGAAAGGAATCACTAAGGTTGCATTCGACCGAGGTGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGATGCAGCTCGTGAAAATGGTCTGGATTTCTAG 489 0.499 MVASSLSFLHSCAFPSSSSSSSLFTTSTPNPNSLPFVVEAKSRTRTDDRTARHARIRKKVEGTPERPRLAVFRSNKHLAVQVIDDTKMHTLASASTMQKAIAEEFSYTAGPTIEVAKKVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAARENGLDF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1941 162 CDD Ribosomal_L18_L5e 56 160 - -
Lja6g1941 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 25 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lja6g1941 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 25 162 - -
Lja6g1941 162 Hamap 50S ribosomal protein L18 [rplR]. 44 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lja6g1941 162 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 44 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lja6g1941 162 SUPERFAMILY Translational machinery components 46 160 - -
Lja6g1941 162 Gene3D - 44 162 - -
Lja6g1941 162 TIGRFAM L18_bact: ribosomal protein uL18 45 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1941 K02881 - gmx:100306308 246.899