Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1924 ATGATCAACAAAACGCTTTTTCTCACTTATGTTTACTTGTTCATCTACATCTTGCTTTCTTCTGGAGTCATTTTGTACAACAAGTGGGTATTGTCTCCAAAATACTTCAACTTTCCCCTTCCTATATCGCTCACCATGATTCATATGGGATTTTCTGGGCTTGTGGCATTTTTCCTTGTCCGGGTGTTTAAGGTTGTAACTCCTGTCAAAATGACTTTTGAAATATATGCAACTTGTGTGGTACCAATAAGTGCTTTCTTTGCATCAAGTCTTTGGTTTGGCAACACTGCCTACTTGCACATCTCTGTGGCTTTTATCCAGATGCTCAAAGCTCTGATGCCGGTAGCAACTTTCATTATGGCTATTATGTGCGGAACTGACAAAGCAAGGTGTGATGTGTTCTCGAACATGTTGCTGGTCAGTGTTGGGGTTGTCATTTCCTCCTATGGGGAAATTCATTTTAATGTAGTTGGTACAGTTTACCAGGTCACTGGCATCTTTGCAGAAGCTTTAAGACTGGTCTTAACACAAGTTCTTCTTCAGAAGAAAGGATTGTCTTTAAATCCTATTACAAGCTTATATTACATAGCTCCTTGCAGTTTTGTGTTTCTCTTTGTGCCCTGGTGCCTACTGGAGAAGCCTGTGATGGAAGTTTCACAGATTCAGTTCAATTTTTGGATCTTCTTTTCCAATGCTTTATGTGCTCTAGCATTGAATTTCTCCATTTTCTTAGTCATTGGTAGAACTGGTGCTGTAACCATCCGGGTTGCCGGTGTACTTAAAGACTGGATATTGATAGCTCTTTCGACAGTTATATTTCCAGAGTCTGCAATAACCGGGTTGAATATAATTGGTTATGCTATTGCACTGTGTGGAGTTGTGATGTACAATTACATTAAGGTTAAAGATGTCCGTGCCTCTCAATTGCCCGCTGAAAGTATTCCAGATCGGTTGACCAAGGACTGGAAATTCGAGAAGAAATCGTCTGATATTTTTGTGCCAGATAGCGTTAGTGAAAATGAGGGAAGTAGTGGAGGTGATGGTATAGCCTCTGATATAAACTTTGATGAAGAAGCACCATTGATTTCATCATCAAGGTTATCTCATATTGGGCGTACGCAGCTATCCAAGTGA 1134 0.4021 MINKTLFLTYVYLFIYILLSSGVILYNKWVLSPKYFNFPLPISLTMIHMGFSGLVAFFLVRVFKVVTPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFIMAIMCGTDKARCDVFSNMLLVSVGVVISSYGEIHFNVVGTVYQVTGIFAEALRLVLTQVLLQKKGLSLNPITSLYYIAPCSFVFLFVPWCLLEKPVMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESAITGLNIIGYAIALCGVVMYNYIKVKDVRASQLPAESIPDRLTKDWKFEKKSSDIFVPDSVSENEGSSGGDGIASDINFDEEAPLISSSRLSHIGRTQLSK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1924 377 Pfam Triose-phosphate Transporter family 11 297 IPR004853 -
Lja6g1924 377 MobiDBLite consensus disorder prediction 333 352 - -
Lja6g1924 377 MobiDBLite consensus disorder prediction 333 347 - -
Lja6g1924 377 PANTHER SOLUTE CARRIER FAMILY 35 1 352 - -
Lja6g1924 377 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1924 Lja-Chr6 46954375 46960604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1924 1 377 Organic Solute Cotransporters AT3G17430 84.881 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1924 - - gmx:100812996 694.115