Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1917 ATGACTACATTCGAGGTGGTTTTCATCGCTACCCCCGCCCTCGGAAACCTTATCCCCGCCGTCGAATTCGCCAACCTCCTAACCAAACACCACCGTCATCTCTCCGCCACCGTTCTCATCATCACCATCCCTCACCGACCACTCGTCAACACCTACGCCCAATCCCGCGCTTCCTCCGCCACCAATCTCCGATTCCTCCACCTCCCTCCGGTGGACCCGCCCGCACCCGATCAGTACCGCTCCTCCTTCGCCTTCATCAACCTCCTCATCGAGAAACATAACCACCACATCAAACGCGCACTGCTTGACCTCAAGTCAACTTCCGATTCGGTCCGAATCGCTGCGTTGTTCGTTGATATGTTCACCACCACCGCTATTGACATCGCCGCCGAGCTCGATGTCCCCTGCTACCTCTTCTTCGCTTCGCCGGCGAGCTTCCTCGGATTCACGCTCCACCTGCCATCATCGGAAGCTATGGAATCGGAAACTGAGTTTGTGGTTCCGAGTTTCAGAAACCCGCTGCCCCGACCCGTTTTACCGAACCTGGTTCTGGATGCTGGAGACGCGAGATCCTGGGTTTCATACCATGCGGGAAGGTACAGGGAGACAAAGGGCATTGTTGTAAATACTGTTGATGAGCTTGAGCTTTACGCGCTTCGGTCACTCCATGATGATCCGCGGTTGCCACCAGTTTACGCGATTGGGCTTGTTCTTGACCTTGACGGTTCGGCCCGATGGGACCCGAACTGGGTCCAGTGTGGTCAGATCATGGAGTGGCTGGACCGGCAGCCAACGAGTTCTGTGGTTTTTCTATGCTTTGGTAGCATGGGAAGCCTGAAACCAAGCCAGGTCGAGCAGATTGCGATTGGGCTTGAGCGGGCCGGGGTGAGGTTTTTATGGGCTTTGCGCGAGCCTCCGAAGGCCCAATTATCGGACCCAAGGGACTATGAAGATTACAAGGATGTGTTGCCAGATGGGTTTCTAGAACGAACGACGGGGATTGGTTTGGTTTGCGGGTGGGTCCCGCAGATGAAGGTGTTGGCCCACGTGGCAATTGGTGGGTTCGTGTCACATTGCGGGTGGAACTCGATATTGGAGAGCTTGTGGCACGGCGTGCCGATTGCCACATGGCCAGTGTACGCGGAGCAGCAGATGAATGCATTTGAGATGGTTAAGGAACTGGGTTTAAGTGTGGAGATTAGGTTGGATTATAGGGCGGGTGGGGATCTGGTGCGGGCGGAGGAGGTTGAGAAGGGTGTGAGGTTGCTGATGAACGATAGTGATGAGATCAGGAGAAAGGTGATGGAGATGAGTGGTAAGTGTAGGATGGCCTTGATTGAGAATGGGTCATCTTACGGTAACCTTGTGTTCCTTATTCAAGAGTTGACCAACCCATGCATATGA 1404 0.5456 MTTFEVVFIATPALGNLIPAVEFANLLTKHHRHLSATVLIITIPHRPLVNTYAQSRASSATNLRFLHLPPVDPPAPDQYRSSFAFINLLIEKHNHHIKRALLDLKSTSDSVRIAALFVDMFTTTAIDIAAELDVPCYLFFASPASFLGFTLHLPSSEAMESETEFVVPSFRNPLPRPVLPNLVLDAGDARSWVSYHAGRYRETKGIVVNTVDELELYALRSLHDDPRLPPVYAIGLVLDLDGSARWDPNWVQCGQIMEWLDRQPTSSVVFLCFGSMGSLKPSQVEQIAIGLERAGVRFLWALREPPKAQLSDPRDYEDYKDVLPDGFLERTTGIGLVCGWVPQMKVLAHVAIGGFVSHCGWNSILESLWHGVPIATWPVYAEQQMNAFEMVKELGLSVEIRLDYRAGGDLVRAEEVEKGVRLLMNDSDEIRRKVMEMSGKCRMALIENGSSYGNLVFLIQELTNPCI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1917 467 PANTHER GLYCOSYLTRANSFERASE 4 463 - -
Lja6g1917 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 460 - -
Lja6g1917 467 Gene3D Glycogen Phosphorylase B; 245 443 - -
Lja6g1917 467 Gene3D Glycogen Phosphorylase B; 7 455 - -
Lja6g1917 467 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Lja6g1917 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 409 IPR002213 GO:0008194
Lja6g1917 467 PANTHER GLYCOSYLTRANSFERASE 4 463 - -
Lja6g1917 467 CDD GT1_Gtf-like 6 462 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1917 Lja-Chr6 46879541 46881340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1917 5 462 Glycosyltransferase AT1G07250 41.895 4.09e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1917 - - gmx:100775567 683.33