Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1910 ATGGCGGCCTCTGATCCCAACAAGTTGATCGCCAAAGCTGATAAGCTAACAAGACTCAGTCTCACGAGGTGGAATGCAGATTGGAGAAATGCTACTGTTCTTTATGAGCAGGCTGCGAATGGATTTAGACTTGCCAAGGACTATGAGAAAGCCAAAATTGCATTTGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCCGCTGCCCTGGCCAAGGAACTGAGCAACTGGAGAGAAGCTGCGGACTTCTATAGAAAGGCATCTGAGTTGTACATGGAATGTGACAGACCACAACCTGCATCTGATGCTCTTGGAAAGGGAGCCCGTGCTTTGGAAGATGCCATGCCTGAAGAAGCTGTTCAGCTATATGCAGATGCTTGTACAATTCTTGAAGAGGATGGAAAGGAACAGATGACCTTTGATCTATATCGCGCTGCCAGTAGTGTTTATATAAAACTTGAGAAATATACAGACGCCGCATCTGTCATGTTGAATTTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAACAGTCAGTGCAAGGCATACCTTGGTGCGATTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCACAGAAATGCTATAATGATTGCTCTCAGATTGATGCTTTTCTCAGCAGTGATCAGAGTCGTTGTGCTAGCAAGTTTCTTGCTGCCTACACTGACGGAGACGTTGAAGAAATCAAGCGCATTGCTCAGTCAAGCGCTGTGTCCCATCTTGACCATGTAATCATTAAGCTTGCAAGGAAACTTCCGACAGGTGATGTGAGTGGATTTAAGACTGCCACTGCTGAAGATGATGAGCAGCTGGACGAAGATGACCTGACTTAA 888 0.4538 MAASDPNKLIAKADKLTRLSLTRWNADWRNATVLYEQAANGFRLAKDYEKAKIAFEKASKGQEMLSSPWDAAKHMESAAALAKELSNWREAADFYRKASELYMECDRPQPASDALGKGARALEDAMPEEAVQLYADACTILEEDGKEQMTFDLYRAASSVYIKLEKYTDAASVMLNLGLAADKCNATNSQCKAYLGAIIIYLYAHDFKQAQKCYNDCSQIDAFLSSDQSRCASKFLAAYTDGDVEEIKRIAQSSAVSHLDHVIIKLARKLPTGDVSGFKTATAEDDEQLDEDDLT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1910 295 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Lja6g1910 295 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 285 IPR000744 GO:0006886
Lja6g1910 295 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
Lja6g1910 295 Pfam Soluble NSF attachment protein, SNAP 5 264 - -
Lja6g1910 295 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 285 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1910 K21198 - gmx:100790986 489.189