Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1899 ATGGCTTCAGGAAATGAAGAAGAGCTTGGTTTCAATGCAGTTCCAGATGAGACAAAGCCAAAGCATCATGACTGGGTCCTTCTGTCCCTCAGGGTGGTTGCATTTTTGGCCACTGCATCTGCCACACTTGTGATGGCATTCAACAAACAGACCAAAACTTTGGTGGTTGGCACAAATGGTAACACCCCCATAACAGCTACTCTCAGTGCAAAGTACAATCAAACTCCAGCGTTTGTGTTCTTTGTGATGGCCAATGGAAATGCCAGTCTCCATAACTTGGTGATGATAGCATTGGATCTATTAGGACCCCAATATGATTACAAAGGACTCAGGCTTGCATTGATTGCAATATTAGATATGATGACCATGGCTCTGGCATCAGCTGGAGATGGAGCAGCAACATTCATGTCAGAATTGGGAAGAAATGGGAATTCACATGCAAGGTGGGATAAGATCTGTGACAAATTTGGAAGCTATTGCGACCGGGGTGGTGCTGCCCTCATTGTCTCTTTCATTGGCTTCATTCTCCTTTTCATTATTACAGTGATGTCCATTGTCAAGCTGCTCAAGCCACATCGCATTAACCATGCTTCTCCATAA 600 0.445 MASGNEEELGFNAVPDETKPKHHDWVLLSLRVVAFLATASATLVMAFNKQTKTLVVGTNGNTPITATLSAKYNQTPAFVFFVMANGNASLHNLVMIALDLLGPQYDYKGLRLALIAILDMMTMALASAGDGAATFMSELGRNGNSHARWDKICDKFGSYCDRGGAALIVSFIGFILLFIITVMSIVKLLKPHRINHASP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1899 199 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 28 187 IPR006459 -
Lja6g1899 199 PANTHER CASP-LIKE PROTEIN 1B2 16 191 - -
Lja6g1899 199 Pfam Casparian strip membrane protein domain 23 176 IPR006702 -
Lja6g1899 199 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 16 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1899 Lja-Chr6 46361046 46362512 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1899 - - gmx:100792043 323.939