Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1897 ATGAACTTGAACATCTTCAAGAAGAAAACCTCACCCAAAGAAGCTCTGCGGAGTAGTAAGAGAGAAATGGCTGTTGCAACAAGAGGAATTGAAAAGGAGATAGCATCACTTCAGATGGAGGAAAGGAAATTGGTGGCAGAGATTAAACGAACAGCCAAAACCGGAAATGAGGCTGCCACTAGAATATTGGCTCGTCAACTTGTTAGGCTACGCCAACAGATAACCAATTTGCAGGGAAGTCGTGCTCAGATCAGGGGTGTTGCAACTCACACACAGGCATTATATGCAAGTACTTCAATCTCTACAGGTATGAAGGGTGCCACTAAAGCAATGGTGGCAATGAATAAGCAAATGGCACCAGCAAAGCAGGCGAAGGTGATCCAAGAATTCCAAAAGCAGTCAGCACAAATGGACATGACGATTGAGATGATGTCAGAATCCATAGATGAAACTTTAGACAAAGATGAAGCTGAGGAAGAAACAGAAGAGCTCACTAACCAGGTTCTTGACGAGATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGACGGATTGGTTCAAGGAGTGCTGAAAATGTTGCGCCAAGACCAGCAGAATCCAATGATGTGGAAGATCTTGAAAAGAGACTGGCTTCTCTTCGGAGGATATGA 660 0.4424 MNLNIFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIQEFQKQSAQMDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIGSRSAENVAPRPAESNDVEDLEKRLASLRRI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1897 219 MobiDBLite consensus disorder prediction 180 208 - -
Lja6g1897 219 PANTHER BNAA08G30490D PROTEIN 4 219 - -
Lja6g1897 219 Pfam Snf7 20 187 IPR005024 GO:0007034
Lja6g1897 219 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 219 IPR005024 GO:0007034
Lja6g1897 219 Coils Coil 147 167 - -
Lja6g1897 219 Gene3D - 6 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1897 Lja-Chr6 46346299 46351413 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1897 K12191 - gmx:100777179 368.237