Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1882 ATGCAAGTTCTGAAATCAGCCACCCAAATGGAGACCGCGCCACCTCTTCCACTGCCGGTGTTGGAGCTTGAGATGAGGGCTCCCTATGAGATGATCCACCACCTGGCCTCGAGCAACGCGGTGGTGGTCTTCAGCATGAGCGATTGCTGCATGTCCACGGTGGCCAAGCGCCTCCTATTCAGCCTCGGCGTCGGCCCTACCGTGGTGGAGCTGGACGAGCGTGCCGACGGGCCTAGCATCCGGGCCGTCCTCTACCAGCTCGTCGGAGCCCATCAGCCCACCCTTCCTGCTGTCTTTATAGGAGGGAAGTTTGTTGGTGGGGTTGAGACACTCATGGCGAGGCATATCAACGGCACCCTCGTCCCTCACCTCAAGGAAGCTGGAGCACTCTGGCTCTGA 399 0.604 MQVLKSATQMETAPPLPLPVLELEMRAPYEMIHHLASSNAVVVFSMSDCCMSTVAKRLLFSLGVGPTVVELDERADGPSIRAVLYQLVGAHQPTLPAVFIGGKFVGGVETLMARHINGTLVPHLKEAGALWL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1882 132 TIGRFAM GlrX-like_plant: glutaredoxin-like family 33 132 IPR011905 -
Lja6g1882 132 PANTHER GLUTAREDOXIN 24 132 IPR011905 -
Lja6g1882 132 Gene3D Glutaredoxin 28 130 - -
Lja6g1882 132 Pfam Glutaredoxin 41 105 IPR002109 -
Lja6g1882 132 ProSiteProfiles Glutaredoxin domain profile. 29 131 - -
Lja6g1882 132 PANTHER GLUTAREDOXIN-C9 24 132 - -
Lja6g1882 132 CDD GRX_GRXh_1_2_like 40 122 - -
Lja6g1882 132 SUPERFAMILY Thioredoxin-like 29 131 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1882 Lja-Chr6 46099736 46100134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1882 30 132 Miscellaneous Gene Families AT4G15700 49.515 7.82e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1882 K03676 - gmx:100775537 196.823