Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1868 ATGGGAGCAAGAAGTTGGCGATTAGTGTTATTTTCGTTGAGTCTTTTGTTCAGCTCAGGTCTAGCTACAGCAATGATGATATCAAGGGATGAAGAAAATCAGGAAATCCCATCATATGATTTTGGTACTCAATTTGATTCAGTTCCTATTGTTAACCCTACAACTCCAGGCTCAGCATATCCATCTCCTATTCCCACATTAAACCCAACTTCTCCACAAGCATCTGATACAACAGGCCAAACCCCAGCAACCCCCACAAACCCATACACAAACCCTACATCCCCTACAACCCCAGACATGAGTCCTTCCACCCCAACAAACCCATTCACAAACCCTACAACCCCTACAAACCCATACACAAACCCAACAACCCCCACAAGCCCAGACACAAACCCAACAACCCCCACAAGCCCAGACACAAACCCAACAAGCCCCACAAACCCATACACAAACCCAACAACACCTACTACAACTCCTACAAGCCCAACCACTTCAGGAGGTGGTCAATGGTGTGTTGCAAGCCCATCAGCTGCAGAGAACACTCTGAAGGTAGCTCTTGACTATGCTTGTGGGTATGGTGCAGACTGTTCAGCAATTCAACAAGGAGGAAGTTGTTATAACCCAAATACTCTGAAAGACCATGCTTCTTATGCATTCAATGACTACTACCAAAAGAATCCAGCACCTACAAGCTGTGCATTTGGTGGAGCAGCAACACTTACAAACAAAGATCCAAGTAATGGGAACTGCCACTACACATCAGGCAAAACACCAAGAGTGAGTCCACCAACAACTATGAGCTCACCGAATCCACCAAGTCCACCAAGCACTATGACTCCAACTATGACCCCACCTACACCAAGCTTTATGACCCCATCCTCACCGAGCACGATGATTCCCGGTGGAACATCATCAGTCTATGGTTCAGCACCAGCAGGAAGCCCCAATAAAGCCACATCTGCTTCTCATTCAGTGCTGCTTTTATTTGCCTTATTTGGCCTCTGGGCTTCAATTCATGCAGAAAACAACATCTAG 1035 0.4638 MGARSWRLVLFSLSLLFSSGLATAMMISRDEENQEIPSYDFGTQFDSVPIVNPTTPGSAYPSPIPTLNPTSPQASDTTGQTPATPTNPYTNPTSPTTPDMSPSTPTNPFTNPTTPTNPYTNPTTPTSPDTNPTTPTSPDTNPTSPTNPYTNPTTPTTTPTSPTTSGGGQWCVASPSAAENTLKVALDYACGYGADCSAIQQGGSCYNPNTLKDHASYAFNDYYQKNPAPTSCAFGGAATLTNKDPSNGNCHYTSGKTPRVSPPTTMSSPNPPSPPSTMTPTMTPPTPSFMTPSSPSTMIPGGTSSVYGSAPAGSPNKATSASHSVLLLFALFGLWASIHAENNI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1868 344 MobiDBLite consensus disorder prediction 143 168 - -
Lja6g1868 344 PANTHER BETA-1,3 GLUCANASE 97 334 - -
Lja6g1868 344 MobiDBLite consensus disorder prediction 49 168 - -
Lja6g1868 344 MobiDBLite consensus disorder prediction 69 87 - -
Lja6g1868 344 Gene3D - 167 260 - -
Lja6g1868 344 Pfam X8 domain 169 239 IPR012946 -
Lja6g1868 344 MobiDBLite consensus disorder prediction 245 263 - -
Lja6g1868 344 MobiDBLite consensus disorder prediction 245 318 - -
Lja6g1868 344 MobiDBLite consensus disorder prediction 292 318 - -
Lja6g1868 344 MobiDBLite consensus disorder prediction 264 291 - -
Lja6g1868 344 PANTHER BETA-1,3 GLUCANASE 97 334 IPR044788 -
Lja6g1868 344 SMART X8_cls 169 252 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1868 Lja-Chr6 45987698 45990080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1868 111 255 Glycoside Hydrolase AT4G26830 39.610 1.48e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1868 - - lja:Lj6g3v1093470.1 431.024