Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1866 ATGGACGAGTCATGGAGGATGCGGATAGGATTAACGCCAGCTATCCCTAGCCGGCGATCCATGGAAGACCATTCAAATTCCCGGACAAGGAGGTCCATCTTCTCCATCGCCGGCGCCTCCGAGCCGGAAACCTTGGACGCCGACGACTTCTCTGACGTCTTCGGGGGGCCGCCGCAAAGCCTCCTCGTGCACAAGTTCTCCAGGTCAAATTCATTCTACGAGGAAATGCTACGGCCGTCGGATTTCACTTCTTCGCCGCCGCCGCCGCCGCCGAAGAGCTGCCGGAGTGTGCCGGTGTTCAGGATTCCGGCGAAGAATGAGTCGTTTTACAGCGATATATTCGGGTCGGACGATGAACGGAGATCGATGGAGCTGTCCGGGTCGCAATCGATAGCGAAATCGAAGTCGAATTCGTCGTCGGCGGTGAGTTCAGAGGAGCTGAGCCCTCTCCGGCCGGCGATCCGTGATGACGTGGCATTATCCGCCTTTTCTTCAAATCTCAGGCCAATTAATACCCCATGTAGATGGAACTCATCCACTATGATGCCTGAGGAACACCCAATTAAACCAGAGAGGCCACTTTTTTCATGCAATGGTCAGCCATTTGACATGCAGAGTCAGGATAATGAGTATAAGGAGAACTTCAAAAGTCCTCATGTAGGATTCACAAGAAGAGTCTCATCCCCAGAAACAATCAGTCTTGAATCCAATTCATATAAAAGCATCAAAGTATCCGGTGATGACTGGGAAGTCAACTCCCCATTTTCTGCTGTCTCTGGACTTTGTCAAGAACCTGAATCAAAGTCTTCAGTTCATGATCATGTGCTTCCAGAACTAGTTATAGAGCAGGATGATGATTATGATAGTGATGATGATGAAGTTATGAGCTCCTATGTCATAGAGGTCAACTCCAACCTCAGAGAGGAGTATTGTGAAACAACAGGCATTGATGAAGCAATTGCGTGGGCCAAAGAAAAGTTTCAATCACATAAATCTAATGAAGAATCAAGCTTGCGAAACGACGGCAATGAGAAAACTCCTGGGATGGAAGGAAGGCCTGGTCCAGGTGATTACCATAATGGTGGGATCGGAATAGTTAAATCTCCCCAGAAGGTACAGACAGAAACAGAGAAGTTGGACAGAGATGTAAGATATTGGTCATCTGGCAAGGAAACTGATATCAGGACACTGCTTTCAACACTACATAGTATTCTGTGGCCTGAGAGTGGCTGGTATGCTGTTTCTTATATGAGCCTAATAGAAAGCTCACAAGTGAAGAAGGCCTATCAGAGAGCAAGATTATGCCTCCACCCAGACAAATTGCAGCAAAGAGGAGCAACACAGCTGCAGAAGTACATAGCAGAAAAGGCTTTCTCCATTCTTCAGGATGCATGGACTGCATTTATTTCTGAAGAGGTTTCCTTCTAA 1428 0.4769 MDESWRMRIGLTPAIPSRRSMEDHSNSRTRRSIFSIAGASEPETLDADDFSDVFGGPPQSLLVHKFSRSNSFYEEMLRPSDFTSSPPPPPPKSCRSVPVFRIPAKNESFYSDIFGSDDERRSMELSGSQSIAKSKSNSSSAVSSEELSPLRPAIRDDVALSAFSSNLRPINTPCRWNSSTMMPEEHPIKPERPLFSCNGQPFDMQSQDNEYKENFKSPHVGFTRRVSSPETISLESNSYKSIKVSGDDWEVNSPFSAVSGLCQEPESKSSVHDHVLPELVIEQDDDYDSDDDEVMSSYVIEVNSNLREEYCETTGIDEAIAWAKEKFQSHKSNEESSLRNDGNEKTPGMEGRPGPGDYHNGGIGIVKSPQKVQTETEKLDRDVRYWSSGKETDIRTLLSTLHSILWPESGWYAVSYMSLIESSQVKKAYQRARLCLHPDKLQQRGATQLQKYIAEKAFSILQDAWTAFISEEVSF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1866 475 MobiDBLite consensus disorder prediction 1 30 - -
Lja6g1866 475 CDD DnaJ 423 465 IPR001623 -
Lja6g1866 475 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 470 - -
Lja6g1866 475 SUPERFAMILY Chaperone J-domain 370 472 IPR036869 -
Lja6g1866 475 Gene3D DnaJ domain 370 473 IPR036869 -
Lja6g1866 475 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 470 - -
Lja6g1866 475 MobiDBLite consensus disorder prediction 125 146 - -
Lja6g1866 475 MobiDBLite consensus disorder prediction 120 149 - -
Lja6g1866 475 MobiDBLite consensus disorder prediction 331 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1866 Lja-Chr6 45973046 45977579 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1866 - - gmx:100801416 692.189