Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1861 ATGTTGACTGACACCTCTGGAGCTCGGGAAATTGTGATAATGGATCTCGATGAAGAAAGTTCGACAACATCGGTTAGCAGGAGAGTGCCGGCAATTCCAGGTCGGCCGGCACAAAAGGGAGCTTTCTATCAGTTTACACAGCAGAACCTTCCAGCATGTAAACCTGTCCTTACACCTAGAGCAGTCATTGCTACGTTTCTATTGATGGGTTTCATTTTCATTCCTGTTGGACTTGTTACACTTCGTGCTTCGTATAGTGTTGTTGAAATTGAGGACAGGTATGACATTGATTGTGTACCGGATCAATTTAAAAGTAATAAGGTCGCATATATCAAAGATGACTCAATCTCCAAAAACTGTTCACGATTCTTAAAGGTACCTAAGCCAATGAGAGCACCGATTTATATCTATTATCAGCTTGATAACTATTACCAGAACCACCGACGGTATGTAAAAAGTAGAAGTGATCAGCAACTCTTACATGGTCTTGGATACAATCACACCAGTTCTTGTAAACCTGTAGAGTCTTCTGATAATCTTCCAATTGTACCTTGTGGGTTGATAGCATGGAGTATGTTCAATGATACATATATGTTCAATCGTGGGCCAACAAAATTGAAGGTCAATAGGAAGAACATTGCGTGGAAGAGCGATCGCGATCACAAATTTGGAAAGCATGTTTACCCGTTTAATTTTCAGAATGGGACATTGATTGGGGGTGGAAAGTTGGATCAAAGTGTTCCTCTAAGTGATCAAGAAGATCTGATAGTTTGGATGCGTACTGCTGCTCTCCCCAGCTTCCGAAAGTTGTATGGAAGAATTGAAGAGGATTTGGATGCAGATGATGTTATAGTCGTCCACCTAGAGAACAATTATAACACTTACAGTTTTGGTGGAAAGAAGAAGCTTGTTCTGTCGACAACAAGCTGGCTGGGAGGAAAAAATGACTTCCTTGGAGTTGCCAATTTACTTGTTGGAAGCTTTTGTATATTGATCTCGATCATCTTCCTGTTGCTTCATGTGAAAAATCCTAGACCTTATGGGGACACAACCTACTCATCTTGGAATAAGAAAAACACTGCTACCTGA 1089 0.4086 MLTDTSGAREIVIMDLDEESSTTSVSRRVPAIPGRPAQKGAFYQFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRYDIDCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSRSDQQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIAWKSDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRIEEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVGSFCILISIIFLLLHVKNPRPYGDTTYSSWNKKNTAT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1861 362 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 82 345 IPR005045 GO:0016020
Lja6g1861 362 PANTHER ALA-INTERACTING SUBUNIT 2-RELATED 22 360 - -
Lja6g1861 362 PIRSF Lem3/Cdc50 18 358 IPR005045 GO:0016020
Lja6g1861 362 PANTHER CELL CYCLE CONTROL PROTEIN 50 22 360 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1861 Lja-Chr6 45939353 45945902 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1861 - - gmx:100789806 610.527