Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1845 ATGAAATCCAAGAGTTTGAGCTTAGCTCCAGCTCTGACACTCTTCCCAGGCTTGAAACCCCCTCACAAAACCCTACTGTTTCACCAAATCTCTGTTCTTGTTATCACATTCCTTGCTTATGCTTCCTTCCATGCCTCTAGGAAGCCCCCCAGTATTGTCAAGAGTGTACTAGGACCAACTGTTGCATCCAATTTAACTCAAGTTGATTCGGGTTGGCCGCCTTTTAATGGAACTCGTGGCACTCACCGGCTTGGCGAGCTTGATCTCGCATTCCTTACTTCGTACTCGGTTGGCATGTATTTGGCGGGTCATGTTGGCGATCGGATTGATTTGAGGTTGTTCCTTGTGTTTGGGATGATGGGTAGTGGCATTTTCACCGTGCTTTTCGGGTTAGGATATTGGTTGGATGTTCATGTTTTGGGGTTTTTTGTTGGTGTTCAGATTGTTTGTGGAGTGTTTCAGTCAATTGGGTGGCCTTGTGTGGTTGCTGTTGTGGGGAATTGGCTGGGGGAATCGAAGAGGGGATTGATAATGGGGATATGGAACTCGCATACCTCGGTGGGGAATATCATTGGTTCGGTTGTGGCTTCAGGAGCTTTGGAATTTGGATGGGGTTGGTCATTTTTGTTGCCTGGATTTCTGATTATTTTTGTAGGGGTTTTGGTGTTTTTGTTTCTTGTTGTGAACCCTGAGGATATGGGGTTTGCACATTCTGGAATGGACATTGAAATGAGTGCTGAAGCTGAAATACACAGTGAAGAGAATCAGCAGAAAGTGGAATCAGAGGAAGCAAAGCTTATTGAGCCTGATAATTCAGATTCTTCATCTGCAATTGGGTTTCTAGAGGCATGGAAGTTGCCGGGAGTGGCTCCGTTTGCTTTCTGCCTCTTTTTCTCTAAGCTTGTGGCTTACACTTTTCTGTATTGGTTGCCATTCTACATAAGGCACACAGCGGTTGCGGGTGTGCACTTGTCTCACAAAACTGCTGGTTTACTTTCAACAATATTTGACGTTGGAGGAGTCCTAGGCGGAATCACTGCGGGTTTCATTTCTGATATGATTGAAGCTCGTGCCATTACTTCAATTCTGTTCTTGTTTCTTTCAATTCCAGCTCTCATTTTGTATCGTGCTTTTGGAAGTATCTCTATGTTGACCAACATCTCTTTAATGTTTCTTTCTGGATTTTTGGTGAATGGTCCATACTCACTAATCACAACTGCTGTGGCTGCCGATCTCGGTACACAGAGCTTGAATGGTGGGAACTCACGGGCACTGGCTACTGTTACTGCAATCATAGATGGTACTGGTTCTGTTGGAGCTGCTCTTGGACCACTTATGGCTGGGTATATTTCAACTAGGGGATGGAACAGTGTATTTTTTATGCTCATTTTGTCTATTTTCTTTGCTGGTTTATTCTTGATTCGTGTTGCTAGAACTGAGATAAGAGAGAAGTTTTCAGGATAG 1464 0.4426 MKSKSLSLAPALTLFPGLKPPHKTLLFHQISVLVITFLAYASFHASRKPPSIVKSVLGPTVASNLTQVDSGWPPFNGTRGTHRLGELDLAFLTSYSVGMYLAGHVGDRIDLRLFLVFGMMGSGIFTVLFGLGYWLDVHVLGFFVGVQIVCGVFQSIGWPCVVAVVGNWLGESKRGLIMGIWNSHTSVGNIIGSVVASGALEFGWGWSFLLPGFLIIFVGVLVFLFLVVNPEDMGFAHSGMDIEMSAEAEIHSEENQQKVESEEAKLIEPDNSDSSSAIGFLEAWKLPGVAPFAFCLFFSKLVAYTFLYWLPFYIRHTAVAGVHLSHKTAGLLSTIFDVGGVLGGITAGFISDMIEARAITSILFLFLSIPALILYRAFGSISMLTNISLMFLSGFLVNGPYSLITTAVAADLGTQSLNGGNSRALATVTAIIDGTGSVGAALGPLMAGYISTRGWNSVFFMLILSIFFAGLFLIRVARTEIREKFSG* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1845 487 SUPERFAMILY MFS general substrate transporter 23 481 IPR036259 -
Lja6g1845 487 PIRSF Hexose_phosphate_transp 20 486 IPR000849 GO:0016021|GO:0022857|GO:0055085
Lja6g1845 487 Gene3D MFS general substrate transporter like domains 284 486 IPR036259 -
Lja6g1845 487 Pfam Major Facilitator Superfamily 84 412 IPR011701 GO:0022857|GO:0055085
Lja6g1845 487 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 3 485 - -
Lja6g1845 487 Gene3D MFS general substrate transporter like domains 24 238 IPR036259 -
Lja6g1845 487 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 5-RELATED 3 485 - -
Lja6g1845 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 482 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1845 Lja-Chr6 45798421 45800626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1845 1 487 Organic Solute Cotransporters AT2G13100 73.306 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1845 K13783 - gmx:100813689 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1845 6 45798421 45800626 Lja6g1845 6 45798421 45800626 ECH