Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1829 ATGTCTTCATCACTAATCGTTCCAAATGTGGTGCTCTCCAACAACCGAAACTTACCGGTGATTGGATTCGGAACTGCTACCATCTTAGGCTCCGCTCCCGGCGATGACACCACCAAGGTGGCAGTGCTAGATGCCATTAAGCTCGGTTACAGGCACTTTGACACAGCTTCGATTTATGGGTCAGAGGAGGCACTTGGAGAAGCCATAGCTGAAGCATTAAAACTTGGTCTCGTTGGGTCTAGAGATGAACTCTTTGTCACTTCCAAGCTCTGGTGCTCTGATAATCATCCTGATCTTGTTCTTCCTGCTTTGAAGAAAACACTTCAGTCACTGAAATTAGAATATGTAGATCTTTATTTGATCCACTGGCCCATTGCTTTGAAGCCTGGAAATTGGGACATGCCTTATGATGAAGAGGCCATGGCCCCATTTGACTTGAAGGGTGTGTGGACAAAAATGGAGGAATGCCAACAACTGGGGCTTACAAAAGGCATTGGAGTCAGCAACTTCAGTTGCAAAAAACTTGAAAATTTGCTCTCATTTGCCAATATTCCTCCTGCTGTCAACCAAATTAGGATGAATCCTACTTGGCAGCAAAAGAAGTTAAAAGACTACTGCCAAGCAAAAGGAATATTCATAACTGCCTACTCTCCTTTGGGAGCCAAAGGTACCGTTTGGGGTACCAATGATGTTATGGACAATGAATTGCTCAAGGAAATTGCAAATGCTCATGGAAAATCTTTTGCTCAGGTATGTCTAAGATGGTTGTATGAGGAAGGCGTAACTATGGCAGTTAAGAGCTACAACAAAGAAAGAATGAAGCAAAATCTGGAAATATTTGATTGGTCACTTACAAAAGATGACTATGAAAAAATTAATCAAGTCAAGCAGCACCTTTCGTTGAAGTATGGACCAGCAAAGTTCGTTGAGGACCTTTGGGATGAAGAAAATTAA 954 0.4235 MSSSLIVPNVVLSNNRNLPVIGFGTATILGSAPGDDTTKVAVLDAIKLGYRHFDTASIYGSEEALGEAIAEALKLGLVGSRDELFVTSKLWCSDNHPDLVLPALKKTLQSLKLEYVDLYLIHWPIALKPGNWDMPYDEEAMAPFDLKGVWTKMEECQQLGLTKGIGVSNFSCKKLENLLSFANIPPAVNQIRMNPTWQQKKLKDYCQAKGIFITAYSPLGAKGTVWGTNDVMDNELLKEIANAHGKSFAQVCLRWLYEEGVTMAVKSYNKERMKQNLEIFDWSLTKDDYEKINQVKQHLSLKYGPAKFVEDLWDEEN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1829 317 Gene3D - 6 315 IPR036812 -
Lja6g1829 317 ProSitePatterns Aldo/keto reductase family signature 1. 49 66 IPR018170 GO:0016491
Lja6g1829 317 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 10 315 - -
Lja6g1829 317 Pfam Aldo/keto reductase family 21 295 IPR023210 -
Lja6g1829 317 SUPERFAMILY NAD(P)-linked oxidoreductase 9 299 IPR036812 -
Lja6g1829 317 PANTHER ALDO/KETO REDUCTASE 10 315 - -
Lja6g1829 317 CDD AKR_AKR4A_4B 18 297 IPR044497 GO:0016616
Lja6g1829 317 ProSitePatterns Aldo/keto reductase family signature 2. 153 170 IPR018170 GO:0016491
Lja6g1829 317 PRINTS Aldo-keto reductase signature 187 216 IPR020471 GO:0016491
Lja6g1829 317 PRINTS Aldo-keto reductase signature 153 170 IPR020471 GO:0016491
Lja6g1829 317 PRINTS Aldo-keto reductase signature 106 124 IPR020471 GO:0016491
Lja6g1829 317 PRINTS Aldo-keto reductase signature 45 69 IPR020471 GO:0016491
Lja6g1829 317 PRINTS Aldo-keto reductase signature 231 255 IPR020471 GO:0016491
Lja6g1829 317 PIRSF AKR 5 311 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1829 Lja-Chr6 45606356 45609433 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1829 - - gmx:100788544 484.952